Gene PA14_16930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16930 
Symbol 
ID4383358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1450941 
End bp1452146 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID639323909 
Productputative pyridoxal-phosphate dependent enzyme 
Protein accessionYP_789497 
Protein GI116051664 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00364141 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC CGTCTCCCTG GCGCGCCGAC TTTCCGGCCT TTTCCGCCTT CGCCGCGGAA 
GGCCTGACCT ACCTCGACAG CGCCGCCACC GCCCAGAAGC CACAGGCCGT ACTCGACGCC
CTGAACGGCT ACTACCTCGG CGGCGCCGCC AACGTCCACC GCGCCCAACA TGTCCCCGGC
GAGCGCGCCA CCCGGGCCTT CGAGGCCGCG CGCAGCCGCG TCGCCCACTG GCTGCACGCC
GGCAACCCGG CCGAGGTGCT GTTCACCCGC GGCACCACAG AGGCGATCAA CCTGGTGGCC
TATGGCCTGG AGCGGCATTT CCGGCCTGGC GACGAACTGC TGGTCAGTGC CCTGGAACAC
CATGCCAACC TGCTTCCCTG GCAGCAGTTG GCCCTGCGCC GCGGCCTGGT CCTGCGCGTA
TTGCCGCTGG ACGAGCGCGG GGTGATCGAC CTGGAGCAGG CTCGCCATAT CATCGGCGAG
CGTACCCGCC TGCTGGCGAT CAGCCAGTTG TCCAACGTTC TCGGCACCTG GCAACCAGTG
GTGGAGTTGA TCCAGCTGGC CCGCGAGCGC GGTGCCTGGA CCCTGGTGGA CGGCGCCCAG
GGCAGCGTCC ACGGACGCCA CGACCTGCCG GGCCTGGGCT GCGACTTCTA CGCATTCTCC
GGCCACAAGC TCTACGGCCC CGACGGCATC GGCGTGCTCT GGGGTCGCCC ACAGGCCCTG
GAGCAACTGG CGCACTGGCA GTTCGGCGGC GAGATGGTAC GCCACACCGG CTTCCACGAA
GCCAGCTTCC ATGCCGCTCC GCTCGGCTTC GAGGCGGGCA CCCCGGCGGT TTCCGCGGCG
ATCGGCCTGG GCGCGACCAT CGACTGGCTG GCCACCCTGG ACGAAGCCGA AGTCGCCGCC
CACGAAGGCG CCCTCCACGC CCGCCTGCTC GCCGGCCTGC TGGCGCGCGA CGGCGTCAGC
CTGCTCGGCG AACCGCAGGC AGCGCTGGCC AGCTTCTGCG TCGACGGCGT GCACGTCGCC
GATCTCGCCC ACCTGCTCGG CGAACAGGGC ATCGCGGTGC GCGCCGGCCA CCATTGCGCG
ATGCCGCTGC TGCAACGCCT CGAGGTACCC GGCGCCCTGC GTGTCTCGCT GGGCTTGTAC
AACGATGCCG ACGACCTGGA GCGCTTCTTC CTGGCTCTCG ACCGCTCACT GGAGTTGCTG
CGATGA
 
Protein sequence
MSLPSPWRAD FPAFSAFAAE GLTYLDSAAT AQKPQAVLDA LNGYYLGGAA NVHRAQHVPG 
ERATRAFEAA RSRVAHWLHA GNPAEVLFTR GTTEAINLVA YGLERHFRPG DELLVSALEH
HANLLPWQQL ALRRGLVLRV LPLDERGVID LEQARHIIGE RTRLLAISQL SNVLGTWQPV
VELIQLARER GAWTLVDGAQ GSVHGRHDLP GLGCDFYAFS GHKLYGPDGI GVLWGRPQAL
EQLAHWQFGG EMVRHTGFHE ASFHAAPLGF EAGTPAVSAA IGLGATIDWL ATLDEAEVAA
HEGALHARLL AGLLARDGVS LLGEPQAALA SFCVDGVHVA DLAHLLGEQG IAVRAGHHCA
MPLLQRLEVP GALRVSLGLY NDADDLERFF LALDRSLELL R