Gene PA14_16280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16280 
Symbol 
ID4380218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1390844 
End bp1391485 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID639323855 
Productputative transcriptional regulator 
Protein accessionYP_789443 
Protein GI116051718 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.450776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATG CGTCCCCCCG TCTGACCGAA CGCGGCAGGC AACGCCGCCG CGCCATGCTC 
GACGCCGCCA CCCAGGCCTT TCTCGAACAC GGTTTCGAAG GCACCACCCT GGACATGGTG
ATTGAACGGG CCGGTGGTTC ACGGGGAACC CTGTACAGCT CCTTCGGCGG CAAGGAAGGC
CTGTTTGCCG CGGTGATCGC CCACATGATC GAGGAAATCT TCGACGACAG CGCCGATCAG
CCGCGCCCCG CCGCCACGCT GAGCGCCACC CTCGAGCATT TCGGCCGGCG CTTCCTCACC
AGCCTGCTCG ATCCCCGCTG CCAGAGCCTC TATCGCCTGG TGGTGGCGGA ATCTCCGCGG
TTTCCGGCGA TCGGCAAGTC CTTCTACGAG CAGGGGCCGC AGCAGAGCTA CCTGCTGCTC
AGCGAGCGAC TGGTAGCGGT CGCCCCCCAC ATGGACGAGG AAACGCTCTA CGCGGTGGCC
TGCCAGTTTC TCGAGATGCT CAAGGCCGAC CTGTTCCTCA AGGCCCTCAG CGTGGCCGAC
TTCCAGCCGA CCATGGCACT GCTGGAAACC CGCCTCAAGC TGTCGGTGGA CATCATCGCC
TGCTACCTGG AACACCTGTC GCAGCGCCCC GCGCAGGGCT GA
 
Protein sequence
MNDASPRLTE RGRQRRRAML DAATQAFLEH GFEGTTLDMV IERAGGSRGT LYSSFGGKEG 
LFAAVIAHMI EEIFDDSADQ PRPAATLSAT LEHFGRRFLT SLLDPRCQSL YRLVVAESPR
FPAIGKSFYE QGPQQSYLLL SERLVAVAPH MDEETLYAVA CQFLEMLKAD LFLKALSVAD
FQPTMALLET RLKLSVDIIA CYLEHLSQRP AQG