Gene PA14_16000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16000 
SymbolrplS 
ID4381628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1362646 
End bp1362996 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content61% 
IMG OID639323833 
Product50S ribosomal protein L19 
Protein accessionYP_789421 
Protein GI116051740 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000973438 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.502722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA AGATCATTCA GCAGATCGAA GCTGAACAGA TGAACAAAGA GATCCCGGCG 
TTCGCCCCCG GCGACACCGT GATCGTCCAG GTCAAGGTGA AGGAAGGCGA CCGTCAGCGT
CTGCAGGCCT TCGAAGGCGT CGTCATCGCC AAGCGCAACC GTGGCCTGAA CAGCGCCTTC
ACCGTGCGCA AGATCTCCAA CGGCGTGGGC GTGGAACGTA CCTTCCAGAC CTACAGCCCG
ATCGTCGACA GCCTGAGCGT CAAGCGTCGC GGCGACGTGC GCAAGGCCAA GCTGTACTAC
CTCCGCGCCC TGTCCGGCAA GGCCGCGCGC ATCAAGGAAA AACTGGTCTA A
 
Protein sequence
MTNKIIQQIE AEQMNKEIPA FAPGDTVIVQ VKVKEGDRQR LQAFEGVVIA KRNRGLNSAF 
TVRKISNGVG VERTFQTYSP IVDSLSVKRR GDVRKAKLYY LRALSGKAAR IKEKLV