| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_15990 |
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| Symbol | trmD |
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| ID | 4381629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1361846 |
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| End bp | 1362604 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639323832 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_789420 |
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| Protein GI | 116051741 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000518262 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.555558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAGC GTTTGTGGGT GGGCGTCGTC AGCATCTTTC CGGAGATGTT CCGCGCGATC
AGTGACTATG GCATCACCAG CCGTGCGGTA AAGCAGGGGT TGCTCACGCT GACCTGCTGG
AATCCACGGG TCTACACCGA GGACCGCCAC CAGACGGTGG ACGACCGGCC CTTCGGCGGT
GGCCCTGGCA TGGTGATGAA GATCAAGCCT CTGGAGGGCG CGCTGGCGGA TGCCAGGCAA
GCCGCCGGGG GCAGGAAGGC GAAGGTGATC TACCTTTCGC CGCAAGGCCG CCAGCTGACG
CAGGCGGGCG TACGCGAACT GGCCGAAGAG GAAGCGTTGA TCCTCATCGC CGGGCGCTAC
GAAGGCATCG ACGAGCGCTT CATCGAAGAG CACGTCGATG AAGAATGGTC GATCGGCGAT
TATGTCCTGT CCGGCGGTGA GTTGCCGGCC ATGGTGCTGG TCGATGCAGT GACGCGGTTG
CTGCCCGGTG CATTGGGTCA TGCAGATTCC GCCGAGGAGG ACTCCTTCAC GGATGGCCTG
CTCGACTGCC CGCACTACAC CCGACCCGAG GTGTATGCGG ACAAACGTGT TCCTGAAGTG
TTGCTCAGTG GCAACCATGA ACACATCCGG CGTTGGCGTT TGCAGCAGGC CCTTGGGCGG
ACCTGGGAAC GACGCGCCGA TCTTCTGGAT AGCCGCTCGC TTTCTGGAGA AGAGCAGAAG
CTGCTGGCGG AATACATCCG TCAGCGGGAC GATAGTTAA
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| Protein sequence | MDKRLWVGVV SIFPEMFRAI SDYGITSRAV KQGLLTLTCW NPRVYTEDRH QTVDDRPFGG
GPGMVMKIKP LEGALADARQ AAGGRKAKVI YLSPQGRQLT QAGVRELAEE EALILIAGRY
EGIDERFIEE HVDEEWSIGD YVLSGGELPA MVLVDAVTRL LPGALGHADS AEEDSFTDGL
LDCPHYTRPE VYADKRVPEV LLSGNHEHIR RWRLQQALGR TWERRADLLD SRSLSGEEQK
LLAEYIRQRD DS
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