| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_15540 |
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| Symbol | |
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| ID | 4381705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1314366 |
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| End bp | 1315988 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639323795 |
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| Product | putative mating pair formation protein TrbL |
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| Protein accession | YP_789383 |
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| Protein GI | 116051778 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000145282 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 1.75241e-21 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAGCAC TGCACAAGGC GGCGCTGATC GGCGTCGCGC TCGCGCTCTA CTCCACAGCC
GCGTCGGCCC AGCTCACCAA CCAGGGGATG CTTGACCAAG TGGTAACGGA GTTCGCCACG
CGGGCCACGG CCTGGCAGAC GGTGGTGATG AATGCCGCGA CGTTCTTGTT CTGGACGCTG
GGCACGATCT CGCTGGTCAT CACCTTCGGC TTCATGGCGC TGCGCAAGGC TGACATTGGT
GAGTTCTTCG CCGAGTTCAT CAGGTTCATC CTGTTCTTCG GCTTCTTCCT CTGGTTGCTG
CGCAATGGGC CGAACTTTGC CAACTCGATC ATCCAGTCGC TGTCCAGGAT TGGCGAGCAG
GCTTCCGGTA TCTCCTCGAT CACGCCGTCG GGCATCGTCG ATGTGGGCTT CCTGATCTGG
AAGCAGGCCA TCAACAACCT GTCGGCCTGG TCGCCCATCG ACAGCTTTGT GGGCGTGGTC
TTGAGCGCCG GCATCCTGCT TCTGCTGGCT GTCATCGCCG TGAACATGTT GCTGCTGCTC
GTGTCAGCCT GGCTGCTGTC CTATGCCGGC ATCTTCTTCC TCGGCTTCGG CGGATCGCGT
TGGACTTCCG ACATGGCGAT CAACTACTAC AAGACCGTGC TGGGCGTCGC CGTGCAGATC
ATGACGATGG TGCTGCTTGT TGGCATCGGG AATGATCTGC TGTCCAGCTT CTACGCCAAG
ATGAGCAAGG GCACACTGAA CTTCGAGGAG CTGGGCGTGA TGCTGGTGTT CTGCCTGGCG
TTGCTGCTGC TGGTCAATCG CGTGCCGCCG CTGGTCGCCG GCGTGATTTC CGGTACGGGC
GTTGGGAACG CCGGTGGCAT CGGCAACTTC GGTGCGGGCG CTGCTGTTGG TGCCGCGATG
GGGGCTGCCA GTGTTGCGGC CGGCGCTGCA AGCATGGCCG GCGCTGCCGT GATGAGTGGC
GCGGCCAACC TCGCCGGCGG GGCTTCGGCC GTCAAAGCCG CCTTCGAGAA GGCCCAAGGC
AGCGCGACCG GCGATGCCGG CGCGGGCATG GACATGATGG CGAGCGTGGG GGGCGCGGGT
GCTTCGGGCG GTCAGGACTC AGCCGGCGCA GGGGGATCGC CCTTCGCGCA GGCTGCGGGC
TTCGGGGGCT CGTCGTCGGG TGGCGGCAGC AGCTCGGCCG GCTCGAAGGG GGGTGACAAG
GGCGGCGCCG GCGACAAGGG CAGCAGTTCG ACCACCAGCA CCGGCGACGG TGCCGACAAG
TCGGCCAAGA GTGAACCCAA GCCCTCAGCC GGCGGTGTTG GGCAGGGGCA GCAGGCCGCA
CCAGGCAGCA CTGGCCGCAG TGGCCTGACT CGTGCCGCAG CATTGGCTGC GGGCACCGCC
GGCGAGCTGG CGAAGGGTGC GGGTGCCGTG CTCAGGGGCA AGGCGGTGCA ACTTGCGGAG
GGCTTCCACG AACGCATGGA CCAAACGATC GGCGGCCAAG TGGCAACGGC GATCCGAGCC
AGCACTGCGG CAGAGGCTCC TGCCTTCGAT GGCGACAGCT TGGCCGGCGA GCAGGCCGGT
AATCAGGCGG CCGATCCCGA TGATGAAGTC GCTGCTTTCG TGAATCGCAC GACGCCGGCG
TGA
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| Protein sequence | MKALHKAALI GVALALYSTA ASAQLTNQGM LDQVVTEFAT RATAWQTVVM NAATFLFWTL
GTISLVITFG FMALRKADIG EFFAEFIRFI LFFGFFLWLL RNGPNFANSI IQSLSRIGEQ
ASGISSITPS GIVDVGFLIW KQAINNLSAW SPIDSFVGVV LSAGILLLLA VIAVNMLLLL
VSAWLLSYAG IFFLGFGGSR WTSDMAINYY KTVLGVAVQI MTMVLLVGIG NDLLSSFYAK
MSKGTLNFEE LGVMLVFCLA LLLLVNRVPP LVAGVISGTG VGNAGGIGNF GAGAAVGAAM
GAASVAAGAA SMAGAAVMSG AANLAGGASA VKAAFEKAQG SATGDAGAGM DMMASVGGAG
ASGGQDSAGA GGSPFAQAAG FGGSSSGGGS SSAGSKGGDK GGAGDKGSSS TTSTGDGADK
SAKSEPKPSA GGVGQGQQAA PGSTGRSGLT RAAALAAGTA GELAKGAGAV LRGKAVQLAE
GFHERMDQTI GGQVATAIRA STAAEAPAFD GDSLAGEQAG NQAADPDDEV AAFVNRTTPA
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