| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_15520 |
|---|
| Symbol | trbJ |
|---|
| ID | 4381707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1313291 |
|---|
| End bp | 1314076 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639323793 |
|---|
| Product | conjugal transfer protein TrbJ |
|---|
| Protein accession | YP_789381 |
|---|
| Protein GI | 116051780 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
|---|
| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000000120782 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 7.03351e-22 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACG TCCGTTTTTT AGCGGCTAAA ACCGCGCTCG CCGCCGTTCT GGCCGGCAGC
ATCGTCATCA CGCCTGTGCA GGCGGGTATC CCCGTCATCG ACGGCACCAA CCTGTCGCAG
AACATCATGA CGGCCATCGA ATCGGTGGCT CAAACGCTCA AGCAAATTGA GCAGTACAGC
ACCCAGCTCC AGCAGTATCA GAACCAGCTC CAGAACACGA TGGCTCCGGC AGCCTATATC
TGGGATCAGG CGCAGTCCAC CATCAATGGG CTGATGAACG CCGTCAACAC GCTGGACTAC
TACAAGACGC AGCTCGGCAG CCTGGACAGC TACATCAGCA AGTTCCAGGA CGTGAACTAC
TACAAGGGGT CACCGTGCTT CTCGGCTACT GGCTGCTCGG CCGCCGAATT GGCCGCCATG
AACAACGTGC GGCAGCTCGC CAGCCAGTCG CAGAAGAAGG CCAACGATGC GTTGTTCAAG
GGCTTGGACA AGCAGCAATC GAACCTGACG GCCGACGCGG CGACGTTGCA GCGTCTCCAG
TCGGCCGCGC AGGGTGCGAC CGGCCAGATG CAGGCCATCG GCTACGCCAA CCAGCTTGCC
AGCCAGCAGG CCAACCAGCT CTTACAGATT CGTGGCCTGT TGATCGCGCA GCAGAACGCG
GTGGCGACCA AGATGCAGGC CGACGCCGAC CTTGAGGCCC GGCAGCAGGC GGCGCACGCC
GCTTCGACGG AATCGCGGAT CGGGAAAACG GCAAGCCCGA AAAACTGGCT CGAACTGACC
CGCTGA
|
|---|
| Protein sequence | MKHVRFLAAK TALAAVLAGS IVITPVQAGI PVIDGTNLSQ NIMTAIESVA QTLKQIEQYS
TQLQQYQNQL QNTMAPAAYI WDQAQSTING LMNAVNTLDY YKTQLGSLDS YISKFQDVNY
YKGSPCFSAT GCSAAELAAM NNVRQLASQS QKKANDALFK GLDKQQSNLT ADAATLQRLQ
SAAQGATGQM QAIGYANQLA SQQANQLLQI RGLLIAQQNA VATKMQADAD LEARQQAAHA
ASTESRIGKT ASPKNWLELT R
|
|---|
| |