Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_14390 |
Symbol | |
ID | 4385362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1227836 |
End bp | 1228813 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639323702 |
Product | putative ABC-type transport protein, periplasmic c |
Protein accession | YP_789291 |
Protein GI | 116051866 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGG CCTATAAGAA TAAATGGTTG CCCCTCAGTG CCCTGGCCCT TGGCATGGCC CTGTCCTTCG GCGCCAACGC CGACGAGCAG AAGTCGGTGG CCGTGACCGC CATCGTCGAG CACCCGGCGC TGGACGCCGC TCGCGACGGG GTCAAGGAGG CCCTCCAGGA GGCCGGCTAC GAAGACGGCA AGAACCTCAA GTGGCAGTAC CAGAGCGCCC AGGGCAACAC CGGCACCGCC GCGCAGATCG CCCGCAAGTT CATCGGCGAC AAGCCCGACG TGATCGTCGG CATCGCCACT CCGTCGGCCC AGGCGCTGGT GGCCGCGACC AAGAGCATCC CGATCGTCTT CAGCACCGTC ACCGACCCGG TCGGCGCGCA CCTGACGCCG AGCTGGGAAG CCTCCGGCAC CAACGTCACC GGGGTTTCCG ACATGCTCGC GCTGGACAAG CAGATCGAGC TGATCAAGAA AGTGGTGCCG GGCGCCAAGC GCATCGGCAT GGTCTACAAC CCGGGCGAAG CCAACTCCGT GGTGGTGGTC AAGGAGCTGA AGGAGCTGCT GCCGAAGATG GGCCTGAGCC TGGTCGAAGC CTCGGCCCCG CGTTCGGTGG ACGTCAGCTC GGCGGCGCGC AGCCTGGTCG GCAAGGTCGA CGCGATCTAC ACCAACACCG ACAACAACGT GGTGTCCGCC TACGAGGCGC TGGTCAAGGT CGGCAACGAC GCGAAGATCC CGCTGATCGC CTCCGACACC GACAGCGTCA AGCGCGGCGC CATCGCCGCC CTCGGCATCA ACTACAAGGA GATGGGCAAG CAGACCGGCC GCATGGTGGT GCGCATCCTC AAGGGCGAGA AGCCGGGCGA GATCAAGCCG GAGACCAGCG ACAACCTGCA GCTGTTCGTC AATCCCGGGG CCGCGCAGAA GCAAGGCGTG ACCCTGTCCG ACGAACTGCT CAAGTCGGCC GCGGAAGTCA TCAAGTAA
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Protein sequence | MMQAYKNKWL PLSALALGMA LSFGANADEQ KSVAVTAIVE HPALDAARDG VKEALQEAGY EDGKNLKWQY QSAQGNTGTA AQIARKFIGD KPDVIVGIAT PSAQALVAAT KSIPIVFSTV TDPVGAHLTP SWEASGTNVT GVSDMLALDK QIELIKKVVP GAKRIGMVYN PGEANSVVVV KELKELLPKM GLSLVEASAP RSVDVSSAAR SLVGKVDAIY TNTDNNVVSA YEALVKVGND AKIPLIASDT DSVKRGAIAA LGINYKEMGK QTGRMVVRIL KGEKPGEIKP ETSDNLQLFV NPGAAQKQGV TLSDELLKSA AEVIK
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