Gene PA14_14380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_14380 
Symbol 
ID4385363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1226862 
End bp1227752 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content66% 
IMG OID639323701 
ProductABC transporter permease 
Protein accessionYP_789290 
Protein GI116051867 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.515362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGT TTTCCCTGTT CGGTGCCCTG GAGATCGGCC TGATCTTCAG CCTCGTGGCA 
CTCGGCGTAT TCATCTCCTT CCGCCTGCTG CGCTTCCCCG ACCTCACGGT GGACGGCAGC
TTCCCGCTCG GCGGCGCGGT CTGCGCGACC CTCATCGCCC TCGGCTGGGA CCCGTACAGC
GCGACCCTGG CGGCCACCGC AGCCGGCGCA CTGGCCGGGC TGGCCACCGG CCTGCTCAAC
GTCAAGCTGA AGATCATGGA CCTGCTCGCC AGCATCCTGA TGATGATCGC GCTCTACTCG
ATCAACCTGC GCATCATGGG CAAGCCCAAC GTACCGCTGA TCGCCGAGCC GACATTGTTC
ACCCTGCTGC AGCCGGAATG GCTCAGCGAC TACGTGTTCC GCCCGCTGCT GCTGGTGTTC
ATCGTGATCG CCGCGAAGCT GCTGCTGGAC TGGTTCTTCA CCACCCAGAA AGGCCTGGCG
ATCCGCGCCA CCGGCTCCAA CCCGCGGATG GCCCGTGCCC AGGGGGTCAA CACCGGCGGC
ATGATCCTGC TCGGCATGGC CATCTCCAAC GCGCTGGTGG CGTTGGCCGG CGCGCTGTTC
GCGCAGACCC AGGGCGGCGC CGATATCTCC ATGGGTATCG GCACCATCGT CATCGGCCTG
GCCGCGGTGA TCGTCGGCGA GAGCATCCTG CCCTCGCGCC GGCTGATCCT GGCGACCCTC
GCGGTGATCC TCGGCGCCAT CGTCTACCGC TTCTTCATCG CCCTGGCGCT GAACAGCGAT
TTCATCGGCT TGCAGGCCCA GGACCTGAAC CTGGTCACCG CGGTGCTGGT CACCGTCGCC
CTGGTGATTC CGATGATGAA GAAACGCCTG CTCGGCAAGA AGGGAGCCTG A
 
Protein sequence
MSLFSLFGAL EIGLIFSLVA LGVFISFRLL RFPDLTVDGS FPLGGAVCAT LIALGWDPYS 
ATLAATAAGA LAGLATGLLN VKLKIMDLLA SILMMIALYS INLRIMGKPN VPLIAEPTLF
TLLQPEWLSD YVFRPLLLVF IVIAAKLLLD WFFTTQKGLA IRATGSNPRM ARAQGVNTGG
MILLGMAISN ALVALAGALF AQTQGGADIS MGIGTIVIGL AAVIVGESIL PSRRLILATL
AVILGAIVYR FFIALALNSD FIGLQAQDLN LVTAVLVTVA LVIPMMKKRL LGKKGA