| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_13500 |
|---|
| Symbol | |
|---|
| ID | 4381941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1160401 |
|---|
| End bp | 1161378 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639323635 |
|---|
| Product | putative 2-hydroxyacid dehydrogenase |
|---|
| Protein accession | YP_789224 |
|---|
| Protein GI | 116051933 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ACGTCTTCGT CTTCAGTCGC CTCGCCCCCG AGCATCTCGA ACGCCTGCAA
CGCCAGTTCA ACGTCCGCGT GCTCGAACCG AAACAGGGCG ACATCGACGC CCAGTACGCC
GCCGCCCTGC CCGATACCCA CGGCATGATC GGCGTCGGCC GGCCGCTCGG CGCCAGGCAA
CTGGAACAGG CGAAGCAGCT GGAAGTCATC TCCAGCGTCT CGGTCGGCTA CGACAACTAT
GACCTGGACT ACCTGAACCG CCGCGGCATC GCCCTCACCA ACACGCCCGA CGTCCTCACC
GAGACCACCG CCGACCTCGG CTTCGCCCTG CTGATCAGCG CCGCGCGACG GGTCGCCGAA
CTGGACGCCT GGGTCAAGGC CGGGAACTGG AAGCGCACCG TCGATGCCCC GCAGTTCGGC
ACCGATGTGC ATGGCAAGAA ACTCGGCATC CTCGGCCTCG GCCGGATCGG CGCGGCCATC
GCCCGGCGCG GCCGTTTCGG CTTCGGCATG CAGGTGCTCT ACCACGGCAA CAACCGCAAG
CCGGAACTGG AACAGGAACT CGGCGCGCGC TTCCTCGGCT TCGACGAACT GCTCGGCGAG
GCCGACTTCG TCTGCGTGGT GGTGCCGCTG GGAGCGCAGA CCCGGCGGTT GATCGGCGCG
CGCGAACTGG GCCTGATGAA GCCCTCGGCG ATCCTGGTCA ACGTCGCCCG CGGCCAGGTG
GTCGACGAGG CCGCGCTGGT CGCCGCCCTG CGGGAGAAAC GCATCCTCGG CGCCGGCCTG
GATGTCTACG AGAAGGAACC GCTGGCCGAA TCGCCGCTGT TCGCCCTGGA CAACGTGGTG
ACCCTGCCGC ACATCGGCTC GGCCACCCAC GAGACCCGCC GGGCCATGGC CGAGCGGGCG
CTGCAGAACT TCGAGGCGGC CCTGCGCGGC GAGCGGCCGC TGGACCTGGT CAATCCGCAG
GTGTGGCGAC GCGGCTGA
|
|---|
| Protein sequence | MKKNVFVFSR LAPEHLERLQ RQFNVRVLEP KQGDIDAQYA AALPDTHGMI GVGRPLGARQ
LEQAKQLEVI SSVSVGYDNY DLDYLNRRGI ALTNTPDVLT ETTADLGFAL LISAARRVAE
LDAWVKAGNW KRTVDAPQFG TDVHGKKLGI LGLGRIGAAI ARRGRFGFGM QVLYHGNNRK
PELEQELGAR FLGFDELLGE ADFVCVVVPL GAQTRRLIGA RELGLMKPSA ILVNVARGQV
VDEAALVAAL REKRILGAGL DVYEKEPLAE SPLFALDNVV TLPHIGSATH ETRRAMAERA
LQNFEAALRG ERPLDLVNPQ VWRRG
|
|---|
| |