| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_12970 |
|---|
| Symbol | tauD |
|---|
| ID | 4381983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1110241 |
|---|
| End bp | 1111074 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639323593 |
|---|
| Product | taurine dioxygenase |
|---|
| Protein accession | YP_789182 |
|---|
| Protein GI | 116051975 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.325066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA CCATCCAACC CATCAGCCCG GCCCTGGGCG CCATCGTTTC CGGCATCGAC
CTCGGCGCGC CGCTGGACGA CGCCGGCCAG CGGGCCATCG AGCAGGCCCT GCTCGAACAC
CAGGTGCTGT TCTTCCGCGA CCAGTCGCTG GAACCCAGGA GCCAGGCGCG CTTCGCCGCC
CGCTTCGGCG ACCTGCACAT CCATCCGATC TACCCCAGCG TGCCGGAGCA GCCGGAGGTC
ATCGTCCTCG ACACCGCGGT CACCGACGTG CGCGACAATG CCATCTGGCA CACCGACGTG
ACCTTCCTCG AGACCCCGGC GCTGGGAGCC GTGCTCGCCG CCAAGCAATT GCCGCCGTAC
GGCGGCGACA CCCTCTGGGC GAGCAGCACG GCGGCCTACG AGGCGCTGTC GGCGCCGCTG
CGGCGTCTGC TGGACGGTCT CACGGCGACC CACGACATCG GCAAGTCCTT CCCCCGCGAG
CGCTTCGGCG TCACCGAGGC CGACCTGGCG CGCCTGGAGG AGGCCCGCCT GAAGAATCCG
CCGCGCTCGC ATCCGGTGGT GCGCACCCAT CCGCTCACCG GGCGCAAGGG CCTGTTCGTC
AGCGATGGCT TTACCACCCG CATCAACGAA CTGGAGCCGG CCGAGAGCGA TGCGCTGCTG
AAGTTCCTCT TCGCCCATGC CACGCGACCT GAATTCACCG TGCGCTGGCG CTGGCAGGAA
AACGACGTGG CGTTCTGGGA CAACCGCGTG ACGCAGCACT ACGCGGTGGA CGATTACCGG
CCACAGCGGC GGGTCATGCA TCGCGCCACC ATCCTCGGCG ACAAGCCCTT CTGA
|
|---|
| Protein sequence | MSLTIQPISP ALGAIVSGID LGAPLDDAGQ RAIEQALLEH QVLFFRDQSL EPRSQARFAA
RFGDLHIHPI YPSVPEQPEV IVLDTAVTDV RDNAIWHTDV TFLETPALGA VLAAKQLPPY
GGDTLWASST AAYEALSAPL RRLLDGLTAT HDIGKSFPRE RFGVTEADLA RLEEARLKNP
PRSHPVVRTH PLTGRKGLFV SDGFTTRINE LEPAESDALL KFLFAHATRP EFTVRWRWQE
NDVAFWDNRV TQHYAVDDYR PQRRVMHRAT ILGDKPF
|
|---|
| |