Gene PA14_12960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_12960 
Symbol 
ID4381984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1109316 
End bp1110134 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content71% 
IMG OID639323592 
Producttaurine ABC transporter permease 
Protein accessionYP_789181 
Protein GI116051976 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.299757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.321121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTG ATACCCTCGG ACTCGCCGTC GCCAATCCTG TCCCGCGCAA GCGGCGCCTG 
CCCGGCGACC GTCGGCGCTG GGCCGCCGGT GCCAGCGTGC TGGCCCTGGC CCTGCTGTGG
TGGGCGGCGA CCCGTTTCGG CTGGGTCGAC GTGCTGTTCC TGCCGGCGCC CGAACAGCTC
TTCGAAGCCC TGCAACGGCT ATGGCAGGAG GGCTACCTCG ATGCCAGCCT GCTGCAACAC
GTCGGCACCA GTCTGCTGCG GGTGCTCCTG GCGCTCGGCG CGGCGGTGCT GACGGCGATC
CCGCTGGGCG TGCTGATGGG CCTCAACCCC TTGGCCGGAG CGGCCCTCGA TCCGCTGGTG
GAGTTCTACC GGCCGATCCC GCCGTTGGCC TACCTGCCGT TGATCGTCAT CTGGTTCGGC
ATCGGCGAGC TGAGCAAGGT GCTGCTGATC TACCTGGCGC TGTTCGCGCC GCTGCTGATC
GCTACCGCCG CCGGCGTGCG TCGCGTCGAC CGATCGCGGG TGCAGGCGGT GCGCTGCCTG
GGGGCCAGCC GCTGGCAGGT GGTGCGCTAC GTGATCCTGC CGAGCGCCTT GCCGGAGGTC
CTCACCGGCC TGCGCATCGC CCTCGGCGTC GGCTGGTCGA CCCTGGTCGC CGCCGAGCTG
ATCGCGGCCA ACCGCGGCCT CGGCTTCATG GTCCAGTCCG CCGCGCAATT CCTCGCCACC
GACGTGGTGG TGGTCGGCAT CCTGCTGATC GCCGCCATCG CCCTGGCCTT CGAACTGGGG
CTGCGCTGGG TCCAGCGGCG CTTCGCCGCC TGGGGTTGA
 
Protein sequence
MPTDTLGLAV ANPVPRKRRL PGDRRRWAAG ASVLALALLW WAATRFGWVD VLFLPAPEQL 
FEALQRLWQE GYLDASLLQH VGTSLLRVLL ALGAAVLTAI PLGVLMGLNP LAGAALDPLV
EFYRPIPPLA YLPLIVIWFG IGELSKVLLI YLALFAPLLI ATAAGVRRVD RSRVQAVRCL
GASRWQVVRY VILPSALPEV LTGLRIALGV GWSTLVAAEL IAANRGLGFM VQSAAQFLAT
DVVVVGILLI AAIALAFELG LRWVQRRFAA WG