Gene PA14_12870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_12870 
SymboltesB 
ID4381990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1104835 
End bp1105704 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID639323586 
Productacyl-CoA thioesterase II 
Protein accessionYP_789175 
Protein GI116051982 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.18518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.438746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA TACTGGACAA CCTGGTGGCT TTGCTGAGCC TGGAACCCAT CGAGGAGAAC 
CTGTTCCGGG GCATGAGCCA GGATCTCGGC TTCCGCCAGC TCTATGGCGG CCAGGTCCTG
GGCCAGGCAC TGTCGGCGGC CAGCCAGACG GTGGAGGACG ATCGCCACGT ACACTCCATG
CACGGCTACT TCCTGCGTCC CGGTGACGCC AGCATGCCGG TGGTCTACCA GGTGGACCGG
GTGCGCGACG GCGGCAGCTT CAGCACCCGC CGGGTCACCG CGATCCAGAA AGGCCAGCCG
ATCTTCACCC TGAGCAGCTC CTTCCAGTAC GACGAGGAAG GTTTCCACCA CCAGATCGAG
ATGCCCGAGG TGGTCGGCCC GGATAACTTG CCTTCGGAGC TGGAGCTGAC CCGCCAGCGC
GCCGAGCGGA TTCCCGAGCG CATCCGCGAC AAGCTGCTGT ATCCGAAGCC CATCGAGATT
CGTCCGGTCA CCCAGCACGA CCCCTACGAC CCGCAGCCCG ACGAACCGGT GAAGTACCTC
TGGTTCCGCG CCGACGGCAA GCTGCCGGAC GTCCCGGCGC TGCACAAGTA CCTGCTGGCC
TACGCCTCGG ATTTCGGTTT CCTTACCACC TCGATGCAGC CCCATGCCGT TTCGGTGTGG
CAGAAGACCA TGCAGGTCGC CAGCCTCGAC CACGCCCTGT GGTTCCACCG CGACCTGCGC
GCGGACGAGT GGCTGCTCTA CGCCATCGAC AGCCCCTGGG CCGGCAACGC ACGCGGTTTC
GTGCGCGGCA GCATCTTCAA CCAGAGCGGC CAGCTGGTCG CCTCGTCGAG CCAGGAAGGC
CTGATCCGCA AGCGTGAGGA CTGGGCGTGA
 
Protein sequence
MTQILDNLVA LLSLEPIEEN LFRGMSQDLG FRQLYGGQVL GQALSAASQT VEDDRHVHSM 
HGYFLRPGDA SMPVVYQVDR VRDGGSFSTR RVTAIQKGQP IFTLSSSFQY DEEGFHHQIE
MPEVVGPDNL PSELELTRQR AERIPERIRD KLLYPKPIEI RPVTQHDPYD PQPDEPVKYL
WFRADGKLPD VPALHKYLLA YASDFGFLTT SMQPHAVSVW QKTMQVASLD HALWFHRDLR
ADEWLLYAID SPWAGNARGF VRGSIFNQSG QLVASSSQEG LIRKREDWA