Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_12350 |
Symbol | |
ID | 4382010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1063737 |
End bp | 1065077 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639323549 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_789138 |
Protein GI | 116052019 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA AGCTTTTCAT CGAAACCCAC GGCTGCCAGA TGAACGAGTA CGACTCGTCG CGAATGGCGG ACCTGCTCGG TGAACACCAA GCCCTCGAGG TGACCGAAAA CGCCGCCGAG GCCGACGTCA TCCTGCTCAA TACCTGCTCG ATCCGCGAGA AGGCCCAGGA AAAGGTGTTT TCCAAGCTCG GCATGTGGCG CGAGCTGAAA CAGCAGAATC CCGACCTGGT GATCGGCGTC GGCGGCTGCG TGGCCAGCCA GGAAGGCGCC GCGATCCGTG AGCGCGCGCC CTATGTCGAC GTGGTCTTCG GCCCGCAGAC CCTGCACCGC CTGCCGGAAA TGATCGACGC CGCGCGCAGC ACGCGCAAGC CGCAGGTCGA CGTGTCCTTC CCGGAAATCG AGAAATTCGA CCGCCTGCCG GAACCGCGGG TCGATGGCCC CACCGCCTTC GTCTCGGTGA TGGAAGGCTG CAGCAAGTAC TGCAGCTTCT GCGTGGTGCC CTACACCCGC GGCGAGGAAG TCAGCCGACC ATTCGACGAC GTGATCGCCG AAGTGATCCA CCTGGCCGAG AACGGCGTCC GCGAAGTCAC CCTGCTGGGA CAGAACGTCA ACGGCTTCCG CGGCCTGACC CACGATGGCC GCCTGGCCGA CTTCGCCGAA CTGCTGCGGG TGGTCGCCGC CGTCGACGGT ATCGAGCGCA TCCGCTATAC CACCTCGCAC CCGCTGGAAT TCTCCGACGC GCTGATCCAG GCCCACGCCG AGGTGCCGGA GCTGGTGAAA TTCATCCACC TGCCGGTGCA GTCGGGCTCC GACCGCGTGC TGGCGGCGAT GAAGCGCAAC CATACCGTGC TGGAATACAA GTCGCGTATC CGCAAGCTGA AGGCCGCGGT ACCGGACATC TGCATCAGCT CCGACTTCAT CGTCGGTTTC CCCGGCGAAA CCGAGAAGGA CTTCGAGCAG ACCATGAAGC TGGTGGAGGA CGTCGGCTTC GACTTCTCCT TCTCCTTCAT CTACAGCGCG CGGCCCGGCA CGCCCGCCGC CGACCTCGCC GACGACCTGC CGGAAGAAGT GAAGAAACAG CGCCTGCAGA TCCTCCAGAG CCGCATCCAC CAGCAAGGCT ACGAGATCAG CCGGCGCATG GTCGGCAGCA CCCAGCGGAT CCTGGTCACC GACTTCTCGA AGAAGGACCC AGGCATGCTC CAGGGGCGCA CCGAGAACAA CCGGATCGTC AACTTCCGCT GCGACAATCC ACGCCTGATC GGCCAGTTCG CCCAGGTGCA CATCGACGAC GCGCTGCCGC ACTCGCTGCG CGGTACCCTG ATCGACAGCA CCCTGCATTG A
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Protein sequence | MAKKLFIETH GCQMNEYDSS RMADLLGEHQ ALEVTENAAE ADVILLNTCS IREKAQEKVF SKLGMWRELK QQNPDLVIGV GGCVASQEGA AIRERAPYVD VVFGPQTLHR LPEMIDAARS TRKPQVDVSF PEIEKFDRLP EPRVDGPTAF VSVMEGCSKY CSFCVVPYTR GEEVSRPFDD VIAEVIHLAE NGVREVTLLG QNVNGFRGLT HDGRLADFAE LLRVVAAVDG IERIRYTTSH PLEFSDALIQ AHAEVPELVK FIHLPVQSGS DRVLAAMKRN HTVLEYKSRI RKLKAAVPDI CISSDFIVGF PGETEKDFEQ TMKLVEDVGF DFSFSFIYSA RPGTPAADLA DDLPEEVKKQ RLQILQSRIH QQGYEISRRM VGSTQRILVT DFSKKDPGML QGRTENNRIV NFRCDNPRLI GQFAQVHIDD ALPHSLRGTL IDSTLH
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