Gene PA14_12350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_12350 
Symbol 
ID4382010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1063737 
End bp1065077 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content64% 
IMG OID639323549 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_789138 
Protein GI116052019 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA AGCTTTTCAT CGAAACCCAC GGCTGCCAGA TGAACGAGTA CGACTCGTCG 
CGAATGGCGG ACCTGCTCGG TGAACACCAA GCCCTCGAGG TGACCGAAAA CGCCGCCGAG
GCCGACGTCA TCCTGCTCAA TACCTGCTCG ATCCGCGAGA AGGCCCAGGA AAAGGTGTTT
TCCAAGCTCG GCATGTGGCG CGAGCTGAAA CAGCAGAATC CCGACCTGGT GATCGGCGTC
GGCGGCTGCG TGGCCAGCCA GGAAGGCGCC GCGATCCGTG AGCGCGCGCC CTATGTCGAC
GTGGTCTTCG GCCCGCAGAC CCTGCACCGC CTGCCGGAAA TGATCGACGC CGCGCGCAGC
ACGCGCAAGC CGCAGGTCGA CGTGTCCTTC CCGGAAATCG AGAAATTCGA CCGCCTGCCG
GAACCGCGGG TCGATGGCCC CACCGCCTTC GTCTCGGTGA TGGAAGGCTG CAGCAAGTAC
TGCAGCTTCT GCGTGGTGCC CTACACCCGC GGCGAGGAAG TCAGCCGACC ATTCGACGAC
GTGATCGCCG AAGTGATCCA CCTGGCCGAG AACGGCGTCC GCGAAGTCAC CCTGCTGGGA
CAGAACGTCA ACGGCTTCCG CGGCCTGACC CACGATGGCC GCCTGGCCGA CTTCGCCGAA
CTGCTGCGGG TGGTCGCCGC CGTCGACGGT ATCGAGCGCA TCCGCTATAC CACCTCGCAC
CCGCTGGAAT TCTCCGACGC GCTGATCCAG GCCCACGCCG AGGTGCCGGA GCTGGTGAAA
TTCATCCACC TGCCGGTGCA GTCGGGCTCC GACCGCGTGC TGGCGGCGAT GAAGCGCAAC
CATACCGTGC TGGAATACAA GTCGCGTATC CGCAAGCTGA AGGCCGCGGT ACCGGACATC
TGCATCAGCT CCGACTTCAT CGTCGGTTTC CCCGGCGAAA CCGAGAAGGA CTTCGAGCAG
ACCATGAAGC TGGTGGAGGA CGTCGGCTTC GACTTCTCCT TCTCCTTCAT CTACAGCGCG
CGGCCCGGCA CGCCCGCCGC CGACCTCGCC GACGACCTGC CGGAAGAAGT GAAGAAACAG
CGCCTGCAGA TCCTCCAGAG CCGCATCCAC CAGCAAGGCT ACGAGATCAG CCGGCGCATG
GTCGGCAGCA CCCAGCGGAT CCTGGTCACC GACTTCTCGA AGAAGGACCC AGGCATGCTC
CAGGGGCGCA CCGAGAACAA CCGGATCGTC AACTTCCGCT GCGACAATCC ACGCCTGATC
GGCCAGTTCG CCCAGGTGCA CATCGACGAC GCGCTGCCGC ACTCGCTGCG CGGTACCCTG
ATCGACAGCA CCCTGCATTG A
 
Protein sequence
MAKKLFIETH GCQMNEYDSS RMADLLGEHQ ALEVTENAAE ADVILLNTCS IREKAQEKVF 
SKLGMWRELK QQNPDLVIGV GGCVASQEGA AIRERAPYVD VVFGPQTLHR LPEMIDAARS
TRKPQVDVSF PEIEKFDRLP EPRVDGPTAF VSVMEGCSKY CSFCVVPYTR GEEVSRPFDD
VIAEVIHLAE NGVREVTLLG QNVNGFRGLT HDGRLADFAE LLRVVAAVDG IERIRYTTSH
PLEFSDALIQ AHAEVPELVK FIHLPVQSGS DRVLAAMKRN HTVLEYKSRI RKLKAAVPDI
CISSDFIVGF PGETEKDFEQ TMKLVEDVGF DFSFSFIYSA RPGTPAADLA DDLPEEVKKQ
RLQILQSRIH QQGYEISRRM VGSTQRILVT DFSKKDPGML QGRTENNRIV NFRCDNPRLI
GQFAQVHIDD ALPHSLRGTL IDSTLH