Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_11940 |
Symbol | |
ID | 4383499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1033055 |
End bp | 1033648 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323518 |
Product | hypothetical protein |
Protein accession | YP_789107 |
Protein GI | 116052050 |
COG category | [R] General function prediction only |
COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000538 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTGC CGTTGTTTCC CCTCAACGCC GTGCTGTTCC CCGGTTGCCG CCTGGACCTG CAGATCTTCG AGGCGCGCTA CCTGGACATG ATCAGCCGCT GCATGAAGCA GGGCACCGGT TTCGGCGTGG TGACCATCGG CGAAGGGCGG GAGGTCGGCG AAGCGCCGAG CCGCCTGGCG ATGGTCGGCT GCGAGGCCTC GGTCCGCGAC TGGCAGCAGC GCCCGAACGG CCTGCTGGGC ATCCGCGTGG AGGGCGGTCG GCGTTTCCAG GTGCTGTCGG TGGAGGTCCA GGCCGACCAG CTCAGCGTTG GCGAGATCGA GTGGTTCGAA GACCTGCCGG AGCAACCCCT GACCTACGAA CACAACGATC TCGCCGCGTT GCTCAGCGTG CTGGCCGAGC ATCCGATGGT GGCCGCGCTG GAGATGGGCG GCGAGCCCGG CGGCCAGCAG GACCTGGCCA ACCAGTTGGC CTACCTGCTG CCGTTCGATA CCGAACGCAA GCTCGAACTG CTCGCCCTGC CCGACGCGCA GATGCAACTG GCGCGGATCC AGGTGCTGCT GGAGCACCTG CAGGGCGAGT TGGGTATCGA CTGA
|
Protein sequence | MKLPLFPLNA VLFPGCRLDL QIFEARYLDM ISRCMKQGTG FGVVTIGEGR EVGEAPSRLA MVGCEASVRD WQQRPNGLLG IRVEGGRRFQ VLSVEVQADQ LSVGEIEWFE DLPEQPLTYE HNDLAALLSV LAEHPMVAAL EMGGEPGGQQ DLANQLAYLL PFDTERKLEL LALPDAQMQL ARIQVLLEHL QGELGID
|
| |