Gene PA14_11930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_11930 
Symbol 
ID4383500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1032325 
End bp1033035 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID639323517 
Producthypothetical protein 
Protein accessionYP_789106 
Protein GI116052051 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value7.75125e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGC AGGCCGCCCT CGAGGCGGTG ATCCACCATC CGCTGTTCGG CGTCGGCGTG 
ACCCTGGGCG CCTACCAGTT GGCCCTGGCC GCCTATGAAC GGACCCGCTG GGTGTTCCTG
CAGCCGGTGC TGGTGTCGAT GCTGGTGGTG ATCGGCGTAC TGCTGCTTTG CGGCATCGAC
TACGACGAAT ACAGTGCCAG CGCCAAGGTC CTGACCATTC TCCTCGGCCC CGCCACGGTG
GCCCTGGCGG TGCCGCTGTT CCTCAACCTG CGGCGTATCC GCCAATTGTT CTGGCCGACC
CTGCTGACCC TGGTGGTCGC CGGTACGCTG GCGACGGTGC TGGGCATCGC ATTCGGCTGG
TTGTTCGGTG CCGAGCCGCG GATGCTGATG AGCATGGCGC CGAAGTCGGT GACCTCGCCG
ATCGCCATGC TGGTGGCCAG CCAGATCGGC GGCGTGGCGG CGCTGGCCGC CGTGTTCGTA
CTGATCACCG GGGTGCTCGG GGCGATCCTC GGGCCGGAGC TGCTGCGCGC CATCGGCGTC
CGGCACCCCG CCGCGCAGGG CATGGCGCTG GGCATGACGG CCCACGCGGT GGGCACGTCG
CGGGCCTTGC AGGAAGGCGA GGAGTGTGGT GCCTTCGCCG CCCTGGCGAT GAGCCTGATG
GGCGTTGCCA CCGCAGTGCT GCTACCGTTG GCGGTAGCGC TGGTTGCCTG A
 
Protein sequence
MAWQAALEAV IHHPLFGVGV TLGAYQLALA AYERTRWVFL QPVLVSMLVV IGVLLLCGID 
YDEYSASAKV LTILLGPATV ALAVPLFLNL RRIRQLFWPT LLTLVVAGTL ATVLGIAFGW
LFGAEPRMLM SMAPKSVTSP IAMLVASQIG GVAALAAVFV LITGVLGAIL GPELLRAIGV
RHPAAQGMAL GMTAHAVGTS RALQEGEECG AFAALAMSLM GVATAVLLPL AVALVA