| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_11450 |
|---|
| Symbol | nusB |
|---|
| ID | 4382723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 992358 |
|---|
| End bp | 992837 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639323478 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_789067 |
|---|
| Protein GI | 116052089 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.0546593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATC AAGACAGCGG CAACCCGGCA GCCAAGCCGC CGAAAGGCAA GACCGCCGCT
CGCCGCAAGG CCCGCAGCCT GGCCGTCCAG GCCCTGTACT CCTGGCAGAT CGCCGGCCAG
CCCCTGCACG AGATCGAGGC GCAGTTCCGC ACCGACAACG ACTTCTCCGA GGTCGACGGC
GCCTACTTCC ACGAGATCCT GCACGGCGTG CCGCGGCAGA AGAGCGAGCT GGACTCCACC
TTCGAGCCCT GCCTGGACCG CCCGCTGGCC GAGATCGACC CGGTCGAGCT GGCCATCCTG
CGGCTGTCCA CCTACGAGCT GCGCAACCGC ATCGACGTGC CCTACAAGGT AGTGATCAAC
GAGGGCATCG AGCTGGCCAA GACCTTCGGC GCCACCGACG GCCACAAGTT CGTCAACGGC
GTGCTCGACA AGCTGGCGCC GCGCCTGCGC GCCGCCGAGC TGCGCGGCGG CAAGCGCTGA
|
|---|
| Protein sequence | MSNQDSGNPA AKPPKGKTAA RRKARSLAVQ ALYSWQIAGQ PLHEIEAQFR TDNDFSEVDG
AYFHEILHGV PRQKSELDST FEPCLDRPLA EIDPVELAIL RLSTYELRNR IDVPYKVVIN
EGIELAKTFG ATDGHKFVNG VLDKLAPRLR AAELRGGKR
|
|---|
| |