Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_10850 |
Symbol | |
ID | 4382092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 938752 |
End bp | 940431 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639323428 |
Product | putative dehydrogenase |
Protein accession | YP_789017 |
Protein GI | 116052139 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000202363 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.801894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA CTGCCCGCCG CTCGTTCGAC TACATCGTGG TCGGCGCCGG CTCCGCCGGT TGCGTCCTGG CCAACCGTCT TTCCGCCGAT CCCGCCGTCT CGGTCTGCCT GGTCGAGGCC GGCCCCAGCG ACCGCACGCC GCTCCCCGCC GCCTACATCC GCACGCCGGC CGGGATCATC CGCCTGATCG CCAACCCGAA GTGGAACTGG ATGCATCGCT TCGCCGCCCA GCCCGGCACC GCCAACCAGC CGATCGCCTG CCCGCGCGGC AAGGTCTGGG GCGGCTCCAG CGCGATCAAC GGGATGATCT ACATCCGCGG CGACCGCCAC GACTACGACC GCTGGGCATC CCTCGGCAAC CGTGGCTGGA GCTACGACGA GCTGCTCCCC TACTTTCGCC ACTCGGAACA TTTCGAGCCG GGCGAATCGC CCTGGCACGG GCGCGGCGGC GAATTGAACG TCGCCGCGCA GCGCAGCCCG GGGCCGATCA ACCAGGTGTT CTTCCAGGCC GCCGAGGAAA TGGGCTGGCC GTACAACGCC GACTTCAACG GCGAGCGCCA GGAAGGCATC GGCCCGTTCC ACGTCACCCA GGTCAACGGC GAACGCTGTA GCGCGGCGCG CGCCTTCCTG CACCCGGCCC TGGCGCGGCC CAACCTCACC GTCCTCAGCT CCGCGCTGAC CCTGCGCGTG CTGCTGGAAG GCACCCGCGC CACCGGCGTG GAGATCAGCC AGGCTGGCGA GGTCGTGCAA TTGCAGGCAC GCCGCGAAGT GATCCTCAGC GCCGGCTCGA TCAACTCGCC GCAGCTCCTG TTGCTCTCCG GCATCGGCCC GGCGGCGGAA CTGGCGCGCC ACGGCATCGT CCAGCGCCAT GAGTTGCCTG GGGTCGGCGA GAACCTGCAG GACCACCAGG ACATCGTGCT GATGTACCGC ACCGAGGCCA AGCTCGGCTA CGGCCTGGGT TTCTCGCCGA AGGGCTGGCT GCCGCTGCTG CGCTCGCCCT GGCAGTACCT GTTCGGCCGG CGCGGGGCGC TGACCTCGAA CACCGTCGAG TCCGGTGGCT TCCTCCGCCT CGACCCGCAG GCAGAGACCC CGGAGCTGGG TCTGATCGTC GCCCCCGCGC TGAAGAACCA GCCCCAGCGC CTGGTCCCCT TCGGCCACGG GGTCAGCCTG CACGTCGCGG TGATGCACCC GCAGAGCCGC GGGCGGGTCC GCCTGAACTC GCCGGACCCG CACGACCGGC CGCTGATCGA AGCCAACTTC CTCAGCCACC CTGCCGACCT CGATACCCTG GTCCAGGGTT TCCAACTGGT CCGCAAACTG GCCGCCAGCC GCAGCTTCGC CCGTCACCTC AAGGGCGAGC TGGTACCGGG CCCGCAGGTT TCCAGCCGCG GCCAGATCGA GGCCTGGATC CGCGCCAACC TGGGCACCGT GTTCCATCCG GTGGGCACCT GCAAGATGGG CCACGACCAG CTCGCGGTGG TCGACGACCA GTTGCGCGTG CACGGCCTGC AAGGCCTGCG GGTGGCCGAT GCGTCGATCA TGCCGACGCT GATCACCGGC AATACCAACG CCCCGGCGAT CATGATCGGC GAGAAGGCCG CCGACCTGAT CCTCGGCAAG CCGGCGCCCC ATGCGCCGAC GGAACAGCGG CGGGATGCGC CGGAGCTGGT AGAGGCCTGA
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Protein sequence | MTSTARRSFD YIVVGAGSAG CVLANRLSAD PAVSVCLVEA GPSDRTPLPA AYIRTPAGII RLIANPKWNW MHRFAAQPGT ANQPIACPRG KVWGGSSAIN GMIYIRGDRH DYDRWASLGN RGWSYDELLP YFRHSEHFEP GESPWHGRGG ELNVAAQRSP GPINQVFFQA AEEMGWPYNA DFNGERQEGI GPFHVTQVNG ERCSAARAFL HPALARPNLT VLSSALTLRV LLEGTRATGV EISQAGEVVQ LQARREVILS AGSINSPQLL LLSGIGPAAE LARHGIVQRH ELPGVGENLQ DHQDIVLMYR TEAKLGYGLG FSPKGWLPLL RSPWQYLFGR RGALTSNTVE SGGFLRLDPQ AETPELGLIV APALKNQPQR LVPFGHGVSL HVAVMHPQSR GRVRLNSPDP HDRPLIEANF LSHPADLDTL VQGFQLVRKL AASRSFARHL KGELVPGPQV SSRGQIEAWI RANLGTVFHP VGTCKMGHDQ LAVVDDQLRV HGLQGLRVAD ASIMPTLITG NTNAPAIMIG EKAADLILGK PAPHAPTEQR RDAPELVEA
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