Gene PA14_10820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_10820 
Symbol 
ID4382095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp935422 
End bp936666 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID639323425 
ProductHDIG domain-containing protein 
Protein accessionYP_789014 
Protein GI116052142 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000768614 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.895038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAAAC GCATTCCGGT AACCCAGCTT CGCCTCGGTA TGTTCGTCCA GAGCCTTTGC 
GGCTCGTGGC TGGACCACCC GTTCTGGAAA AGAGGCGGCT TCCTGCTCGA CAACCAGTCC
GACCTGCAGC GCCTGCGCGA AAGCGCCGTG AAGGAGGTCT GGATCGACGC CGGCAAGGGC
CTCGACCTCC CGGAGGAAGC GGCGGTCTCG GCCGCTGCGG TCCTGCCGGT CACCATGCCG
GCCGACCCTT CGCCGGCGCG GGTCGCCCTG GAGGAGGAAA TCCGCCACGC CGCCCTGCTC
TGCGGCCGCG CCAAGGCCGC CGTGGTCAGC ATGTTCCACG ACGCGCGCAT GGGCCAGGCC
ATCGACACCG CGCATGCATC GGACCTGGTG GACGAAATCT CCGCCTCGGT GCTGCGCCAT
CCCAACGCGC TGGTCAGCCT GGTACGGCTG AAGACCTCGG ATGAATACAC CTACATGCAT
TCGGTGGCGG TCTGCGCGCT GATGATCGCC CTCGCCCGCC AGCTCGAACT GTCCGACCCG
CTGGTACACG AGGCGGGGTT GGCGGGACTG CTGCACGACA TCGGCAAGAT GGCGGTACCC
GATCCGATCC TGAACAAGCC CGGCAAGCTC ACCGAGCAGG AATTCGGCCT GGTCCGCCGG
CATCCGCAGA ACGGTGCGCG GATGCTGCTC GATTGCCGCC AGGTCAGCGC CCTGGTGGTG
GATGTCTGCC TGCACCATCA CGAGCGCATC GACGGCACCG GCTACCCCTT CGGCCTGGCG
CAGGAGCAGA TCAGCCTGCT GGCGCGGATG GGCACGGTGT GCGACGTCTA CGACGCGATC
ACCTCCGACC GTCCCTACAA GAAGGGCTGG AACGCCGCCG AGGCGATCCG GCGCATGGCC
GAATGGAACG GGCACTTCGA CCCGCAGGTG TTCCGCGCCT TCGTCAAGGC AGTGGGCATC
TACCCGGTCG GCGCGCTGGT CAGGCTGGAA AGCGGGCGCC TCGGCGTGGT CCTCGAGCAA
CACGGCCGCT CGCTGCTGAC GCCACGGGTC AAGGTATTCT TCTCGGCCCG CTCGAAGGTG
CCGATCCCGC AGCAGGTGAT AGACCTGGGT AGGGCCGGAC AGACCGACCG AATCGTCGGC
TTCGAGCCGG CGGAGGCCTG GAACTTCCGC AATCTCGACG AGATGTGGAC GGGACTGCCG
AGCAACGGCG GGTCGTATTT CGACGCGGGA ACCGGAAAGC CGTAG
 
Protein sequence
MLKRIPVTQL RLGMFVQSLC GSWLDHPFWK RGGFLLDNQS DLQRLRESAV KEVWIDAGKG 
LDLPEEAAVS AAAVLPVTMP ADPSPARVAL EEEIRHAALL CGRAKAAVVS MFHDARMGQA
IDTAHASDLV DEISASVLRH PNALVSLVRL KTSDEYTYMH SVAVCALMIA LARQLELSDP
LVHEAGLAGL LHDIGKMAVP DPILNKPGKL TEQEFGLVRR HPQNGARMLL DCRQVSALVV
DVCLHHHERI DGTGYPFGLA QEQISLLARM GTVCDVYDAI TSDRPYKKGW NAAEAIRRMA
EWNGHFDPQV FRAFVKAVGI YPVGALVRLE SGRLGVVLEQ HGRSLLTPRV KVFFSARSKV
PIPQQVIDLG RAGQTDRIVG FEPAEAWNFR NLDEMWTGLP SNGGSYFDAG TGKP