Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_10330 |
Symbol | |
ID | 4382153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 890143 |
End bp | 891558 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639323387 |
Product | putative outer membrane protein precursor |
Protein accession | YP_788976 |
Protein GI | 116052180 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.339948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGCCC TCGCCGGCCT GTTGTGCGGC CTGCTCGGCC TGGTTCCCGG CGCCGCCGCC TACGAGCCGG ACGTGTTCGG CACCGCCGGC CAGGTCGCCG GCCAGGCGGT CTACGACCTC GGCGGCAGCG GTTTGCCCTG CCGCGGCGGG CCGCCACCGA CCGAGCTGAG CCTGGAGGAA GCCATCGAGC GGATCCTCTG CCACGACCCG CAGACCCGCC TCGCCTGGGC CAATGCCAAG GCCCAGGCGG CCCAGGTCGG GATCGGCAAG TCCGCCTACC TGCCGCGCCT GGACGGCCGT CTCGACGCCA GTCGCGGCTA CAGCGACATG GATTATCGCG ATGCCCCCTA CCTCTCCGGC GACGGCCATC GCCACCGGCG CGGCGCCAGC CTCCAATTGA GCTGGGTGCT GTTCGACTTC GGCCGCCGCA GCGCCGCCCT GCGCAACGCC CAGCAGTTGC TGCTGGCAGC CAACGCCAGC CAGGACGCGA CCCTGCAGAA CACCTTCGCC CTCGCCGCCC AGGCCTACTA CGACGCCCTC GCCGCCCAGC GCAGCCTGGC CGCCTCGCGG CAGGTCGCGG AGCTGGCGGC GCAGAACCTG GAAGCCGCCG ACGCCAAGTA CCGGGCCGGC GCCGCCGCCC TTTCCGATCG CCTGCAGGCG CAGACCGCGC TGTCCCAGGC GAGCCTCGCC CAGGTCCGCG ACGAAGGCGC CCTGAGCAAC GCCCTCGGCG TCATCGCCCT GCGCATGGGC CTGGCGCCGG ATACCCCGCT GCGCCTCTCC GGCGAGCTGG AGGCGCAACC CGACACCGGC TTCGTCAAGG CCATCGACGA GATGCTCGCC GAAGCCCGCC GCGAGCATCC GGCACTGCTC GCCGCCCAGG CGCGGCTGAA GGCCGCCGCC GCCTCGGTGG AGGAAAGCCG CGCCGCCGGC CGGCCGAGCC TGGCGCTGAG CGCCAACCTG GCACGCAGCC ATAGCGACCA GGCGATGGCC TTCAACGGCG ATACCCGCGA ACGCGACCGC AGCATCGGCC TGCAACTGAA CATCCCGTTG TTCGAAGGCT TCGAACGCAC CTACCAGGTC CGCAACGCCC TGGCCCGCCG CGAGGCCAGC GAAGCGGAGC TGGCCGACAC CGAGCAGCAG GTTTCGCTGG AGGTGTGGAA CAACTACCAG TCGCTCAGCG TCGAGACCCG CAGCCTGGCG CGCACCCGCG AACTGGTCGA ACAGTCGCGG CAAAGCCTGG AGGTGGTGCA GGGCCGCTAC CGCTCAGGGG TCGGCAGCAT GATCGAGCTG CTCAACGCCC TGACCGCCTA CGCCAGCGCC GAGGACCAGC ACATCCGTGC CCTCGGCAAC TGGCAGACCT CGCGCCTGCG ACTGGCGGCC AGCCTCGGTC GCCTGGGCTT CTGGAGCCTG CGCTGA
|
Protein sequence | MRALAGLLCG LLGLVPGAAA YEPDVFGTAG QVAGQAVYDL GGSGLPCRGG PPPTELSLEE AIERILCHDP QTRLAWANAK AQAAQVGIGK SAYLPRLDGR LDASRGYSDM DYRDAPYLSG DGHRHRRGAS LQLSWVLFDF GRRSAALRNA QQLLLAANAS QDATLQNTFA LAAQAYYDAL AAQRSLAASR QVAELAAQNL EAADAKYRAG AAALSDRLQA QTALSQASLA QVRDEGALSN ALGVIALRMG LAPDTPLRLS GELEAQPDTG FVKAIDEMLA EARREHPALL AAQARLKAAA ASVEESRAAG RPSLALSANL ARSHSDQAMA FNGDTRERDR SIGLQLNIPL FEGFERTYQV RNALARREAS EAELADTEQQ VSLEVWNNYQ SLSVETRSLA RTRELVEQSR QSLEVVQGRY RSGVGSMIEL LNALTAYASA EDQHIRALGN WQTSRLRLAA SLGRLGFWSL R
|
| |