Gene PA14_10090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_10090 
Symbol 
ID4382174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp866440 
End bp867351 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content68% 
IMG OID639323366 
ProductLysR family transcriptional regulator 
Protein accessionYP_788955 
Protein GI116052201 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000636611 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.898763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCA ATGCGCTCCG TATGTTCGTC GGCGTCGTTC AGGCGGGCAG CCTGTCGGCT 
GCAGCCGCAC GCCTTGAGAT ACCGCTGCCG ACGCTCAGCC GACGGGTCCG CGAGCTGGAG
CACCAGCTCG CCGTGCAACT GCTCGAGCGT TCGGTCCGCG GCACGCGGCT GACCGAGGCG
GGCATGCGTC TCTACGAGAA CGCCGCGCGC GGTGTCGAGA TACTGCACGA GGCGGAGCAG
GCCCTGGCGT CGGACCAGGC GCGTCTGAAG GGACGCCTGC GGTTGTCGTT GCCGCCCGGC
TTCGAACCCT GGTGGGAGCT GCTGGGGGTG TTCCAGCGGC GCTATCCGGA TATCCGCGTG
CAGGTGTTCA CCTCCGAGCG GCGCATCGAT CTCGTCGAGG ATGGGGTCGA CGTGGCCCTT
CGGGTCGGCG CGGTTGCCCA TGAGGCGATG GTGGCGCGCC GCCTCTTCGC CTATCGCCAC
GTTCTGGTGG GTAGCCCGCG CCTGCTTGAA CGCGAGGGTG GAATGGAAAC GCTGGACGAC
CTGCGCCGTT TCCCGGTCGG CATGTGGTAC CCGGGCGGCA GCGGCGAGGG CGCCTGGCTG
CTCGGTGGCC AAGCGGTCAA GCCGCGGATC GTGCTGGCGA CCAATGACTA CGCGCATCTG
CGTGCCCGCG CCCTGGATGC CGAACTGGTC ACCGAGCTAC CACCGTTCAT GGCTGCCGCC
GCGGTGCGTG CGGGGCAACT GATCGAGTTG CTGCCTGAGC ACCCCTTGCC GGAGCAGGAG
ATCCACTTGC TCTATCCGTC GCACCGGCAT CCGTCGACGA TCGTCAGGTG CTACCTGGAT
TTCTGCCAGC AGCACCTGGA CCTGCTGCAC GATGCCTGTC GGCTGGACGG CCCTGCGCCT
GGCGCGGGGT AG
 
Protein sequence
MDLNALRMFV GVVQAGSLSA AAARLEIPLP TLSRRVRELE HQLAVQLLER SVRGTRLTEA 
GMRLYENAAR GVEILHEAEQ ALASDQARLK GRLRLSLPPG FEPWWELLGV FQRRYPDIRV
QVFTSERRID LVEDGVDVAL RVGAVAHEAM VARRLFAYRH VLVGSPRLLE REGGMETLDD
LRRFPVGMWY PGGSGEGAWL LGGQAVKPRI VLATNDYAHL RARALDAELV TELPPFMAAA
AVRAGQLIEL LPEHPLPEQE IHLLYPSHRH PSTIVRCYLD FCQQHLDLLH DACRLDGPAP
GAG