Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09115 |
Symbol | rpoA |
ID | 4383994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 771395 |
End bp | 772396 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639323292 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_788881 |
Protein GI | 116054394 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGTT CGGTAAATGA GTTCCTGACC CCCCGCCACA TCGATGTGCA GGTGGTCAGT CAAACCCGCG CCAAGATCAC GCTCGAGCCT CTCGAGCGTG GTTTTGGTCA CACCCTGGGC AACGCGCTGC GTCGCATCCT GTTGTCCTCC ATGCCTGGCT GCGCAGTGGT CGAGGCCGAG ATCGACGGCG TACTCCACGA GTACTCGGCG ATCGAAGGTG TGCAGGAAGA TGTAATCGAG ATCCTGCTGA ACCTGAAAGG TCTGGCCATC AAGCTGCACG GTCGTGATGA AGTGACGCTG ACCCTGGCTA AGAAGGGCTC GGGTGTTGTG ACTGCTGCCG ATATTCAGCT GGATCACGAT GTTGAGATCA TCAACGGTGA CCACGTTATC GCCAACCTGG CAGACAACGG CGCGCTGAAC ATGAAGCTGA AGGTAGCTCG TGGCCGTGGC TACGAGCCTG CCGATGCACG TCAGAGCGAC GAAGACGAAA GCCGCAGCAT CGGCCGTCTG CAGCTCGACG CATCGTTCAG CCCGGTCCGT CGTGTCTCCT ACGTGGTGGA AAACGCCCGT GTCGAGCAGC GCACCAACCT GGACAAACTG GTCCTGGACC TGGAAACCAA CGGCACTCTG GATCCCGAAG AGGCTATCCG TCGCGCCGCT ACCATCCTGC AACAGCAGCT GGCAGCGTTC GTGGACCTCA AGGGCGACAG CGAACCCGTC GTTGAAGAGC AGGAAGACGA GATCGATCCG ATCCTCCTGC GCCCGGTCGA TGACCTGGAA CTGACCGTAC GTTCGGCCAA CTGCCTGAAG GCGGAAAACA TCTACTACAT CGGTGACCTG ATCCAGCGCA CCGAAGTGGA GCTGTTGAAA ACGCCGAACC TGGGCAAGAA GTCCCTGACC GAAATCAAGG ACGTTCTGGC TTCCCGTGGT TTGTCCCTCG GTATGCGCCT CGATAACTGG CCGCCGGCAA GTCTTAAGAA AGACGACAAG GCCACTGCCT GA
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Protein sequence | MQSSVNEFLT PRHIDVQVVS QTRAKITLEP LERGFGHTLG NALRRILLSS MPGCAVVEAE IDGVLHEYSA IEGVQEDVIE ILLNLKGLAI KLHGRDEVTL TLAKKGSGVV TAADIQLDHD VEIINGDHVI ANLADNGALN MKLKVARGRG YEPADARQSD EDESRSIGRL QLDASFSPVR RVSYVVENAR VEQRTNLDKL VLDLETNGTL DPEEAIRRAA TILQQQLAAF VDLKGDSEPV VEEQEDEIDP ILLRPVDDLE LTVRSANCLK AENIYYIGDL IQRTEVELLK TPNLGKKSLT EIKDVLASRG LSLGMRLDNW PPASLKKDDK ATA
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