| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_09100 |
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| Symbol | rpsD |
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| ID | 4382945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 770752 |
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| End bp | 771372 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639323291 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_788880 |
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| Protein GI | 116052274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.908313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT ACATTGGTCC CAAGTGCAAA CTGTCTCGCC GTGAAGGCAC CGACCTGTTC
CTGAAGAGCG GCGCCCGCGC CCTCGACTCG AAGTGCAAGG CTGAAAACGT TCCTGGCCAG
CATGGCCAGC GTCGTGGCCG TCTGTCCGAC TACGGTCTGC AGCTGCGTGA AAAGCAGAAA
GTACGTCGCA TCTACGGCGT GCTGGAGCGT CAGTTCCGCG GTTACTACCA GGAAGCTTCC
CGTCGCAAGG GTTCTACCGG TGAGAACCTG CTGCAACTGC TCGAGTGCCG CCTGGACAAC
GTCGTATACC GCATGGGCTT CGGTTCCACT CGTTCGGAAT CCCGCCAGCT GGTATCCCAC
AAGGCCATCA CCGTCAACGG TCAGACCGTC AACATCCCTT CCTACCAAGT GAAGGCCGGT
GACGTCGTAG CTGTTCGCGA AAAATCGAAG AACCAGCTGC GTATCGCTCA GGCTCTGGAA
CTCTGTGGCC AGCGCGGTCG CGTCGAGTGG GTCGAAGTCG ACCTCGACAA GAAGGCTGGT
ACCTTCAAGA GTGCTCCGGC TCGCAGCGAC CTGTCCGCTG ATATCAACGA AAACCTGATT
GTCGAGCTCT ACTCCAAGTA A
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| Protein sequence | MARYIGPKCK LSRREGTDLF LKSGARALDS KCKAENVPGQ HGQRRGRLSD YGLQLREKQK
VRRIYGVLER QFRGYYQEAS RRKGSTGENL LQLLECRLDN VVYRMGFGST RSESRQLVSH
KAITVNGQTV NIPSYQVKAG DVVAVREKSK NQLRIAQALE LCGQRGRVEW VEVDLDKKAG
TFKSAPARSD LSADINENLI VELYSK
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