Gene PA14_09020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_09020 
SymbolrpsE 
ID4382952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp767249 
End bp767749 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content59% 
IMG OID639323284 
Product30S ribosomal protein S5 
Protein accessionYP_788873 
Protein GI116052281 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.085618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.293269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA ACGAGCAAAA GCGCGACGAA GGCTACATCG AGAAGCTGGT TCAGGTTAAC 
CGCGTCGCCA AAACCGTAAA AGGTGGCCGT ATCTTCGCTT TCACCGCACT GACCGTGGTG
GGTGATGGCA AGGGTCGCGT TGGTTTCGGT CGTGGCAAGG CGCGTGAAGT GCCGGCCGCC
ATCCAGAAAG CAATGGAAGC CGCTCGCCGC AACATGATCC AAGTCGATCT GAACGGCACC
ACCCTGCAGT ATCCGACCAA GTCCGCCCAT GGCGCCTCCA AGGTGTACAT GCAGCCGGCT
TCGGAAGGTA CCGGCATCAT CGCCGGCGGC GCCATGCGTG CCGTTCTGGA AGTGGCTGGT
GTGCAGAACG TCCTGGCCAA GTGCTATGGC TCCACCAATC CGGTGAACGT GGTTTACGCC
ACCTTCAAGG GCCTGAAGAA CATGCAGGCT CCGGAAGCAG TAGCGGCCAA GCGTGGCAAG
AGCGTCGAGG AGATTCTCTA A
 
Protein sequence
MANNEQKRDE GYIEKLVQVN RVAKTVKGGR IFAFTALTVV GDGKGRVGFG RGKAREVPAA 
IQKAMEAARR NMIQVDLNGT TLQYPTKSAH GASKVYMQPA SEGTGIIAGG AMRAVLEVAG
VQNVLAKCYG STNPVNVVYA TFKGLKNMQA PEAVAAKRGK SVEEIL