Gene PA14_08840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_08840 
SymbolrpsJ 
ID4381339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp759165 
End bp759476 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content52% 
IMG OID639323266 
Product30S ribosomal protein S10 
Protein accessionYP_788855 
Protein GI116052299 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0000352676 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0199275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACC AACAAATCCG GATTCGGTTG AAGGCTTTTG ACCATCGCCT GATCGATCAA 
TCAACCCAGG AAATCGTGGA AACCGCGAAA CGTACTGGTG CTCAGGTGCG TGGTCCAATC
CCTCTGCCGA CCCGCAAGGA ACGTTTCACC GTGCTGATCT CTCCGCACGT CAACAAAGAT
GCGCGTGATC AGTACGAAAT TCGTACACAT AAGCGTGTAC TGGACATCGT CCAGCCGACG
GATAAAACCG TCGATGCGCT GATGAAGCTC GATCTTGCTG CAGGCGTTGA AGTACAGATC
AGCCTCGGCT AA
 
Protein sequence
MQNQQIRIRL KAFDHRLIDQ STQEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD 
ARDQYEIRTH KRVLDIVQPT DKTVDALMKL DLAAGVEVQI SLG