| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_07910 |
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| Symbol | rpe |
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| ID | 4385483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 682237 |
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| End bp | 682911 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639323182 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_788780 |
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| Protein GI | 116054335 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00242873 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAACCCT TCGCCATCGC TCCGTCGATC CTTTCCGCCG ATTTCGCCCG CCTGGGCGAG
GACGTGGACA AGGTGCTCGC CGCCGGTGCC GACATCGTTC ACTTCGACGT GATGGACAAC
CACTACGTGC CGAACCTGAC CATCGGCCCG ATGGTCTGCT CGGCGCTGCG CAAGTACGGC
GTGAGCGCGC CGATCGACGT GCACCTGATG GTGTCCCCGG TGGATCGCAT CATCGGCGAC
TTCATCGAAG CTGGCGCCAC CTACATCACC TTCCATCCGG AAGCTTCCCA GCACATCGAC
CGTTCCCTGC AACTGATCCG CGACGGCGGT TGCAAGGCGG GCCTGGTGTT CAACCCGGCC
ACTCCGCTGG AGGTGCTGAA GTACGTGATG GACAAGGTCG ACATGGTCCT GCTGATGAGC
GTCAACCCCG GCTTCGGCGG GCAGAAATTC ATCCCCGGTA CCCTCGACAA GTTGCGCGAG
GCACGCGCCC TGATCGATGC CTCCGGACGC GAGATCCGCC TGGAGATCGA TGGCGGCGTC
AACGTCAAGA ACATCCGTGA GATCGCCGCG GCGGGCGCCG ATACCTTCGT CGCCGGCTCG
GCCATCTTCA ACGCCCCGGA CTACGCCGAG GTCATCCGCG CCATGCATGC CGAACTGGCC
CAGGCGCACC AGTAA
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| Protein sequence | MQPFAIAPSI LSADFARLGE DVDKVLAAGA DIVHFDVMDN HYVPNLTIGP MVCSALRKYG
VSAPIDVHLM VSPVDRIIGD FIEAGATYIT FHPEASQHID RSLQLIRDGG CKAGLVFNPA
TPLEVLKYVM DKVDMVLLMS VNPGFGGQKF IPGTLDKLRE ARALIDASGR EIRLEIDGGV
NVKNIREIAA AGADTFVAGS AIFNAPDYAE VIRAMHAELA QAHQ
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