Gene PA14_06680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_06680 
SymbolnirH 
ID4383878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp584567 
End bp585082 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content69% 
IMG OID639323082 
Producthypothetical protein 
Protein accessionYP_788682 
Protein GI116054238 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00214108 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCT GCATTTCCCC CTCTGACGCC CTGCTCGCCC GCCGCCTGAT CGAACTGACC 
CAGGCCGGCC TGCCGCTGGT CGCCGACCCT TGGGCGTGGA TCGCCGCGCA ACTGCGGCTG
AGCGAGGCGG AGACCCTGGC GCTGCTGAAG CGCCTGCGCG ACGCCGGGGT GATCCGGCGC
ATCGCTGCGG TGCCCAACCA CTATCGCCTT GGCTACCGGC ACAACGGCAT GACCGTCTGG
GACGTCGCCG ACGAACGCAT CGAACGCCTC GGCCGGCTGG TCGGCGGGCT GTCCTTCGTC
AGCCATTGCT ACCGGCGCCC GCGCCATCTG CCGCAGTGGC GCTACAACCT GTTCGCCATG
GTCCACGGCC GCAGCGAAGC GGAGATCGAA GGCTACCGCC AGCAGATCCG CCTGCTGCTC
GGCGAGGACT GTCGCGCCGA CGAGATGCTG GTGAGCAGCC GCATCCTGAA GAAGACCGGC
CTGCGCCTGG CGCAGAAGGA GGAACGTCCA TGCTGA
 
Protein sequence
MSACISPSDA LLARRLIELT QAGLPLVADP WAWIAAQLRL SEAETLALLK RLRDAGVIRR 
IAAVPNHYRL GYRHNGMTVW DVADERIERL GRLVGGLSFV SHCYRRPRHL PQWRYNLFAM
VHGRSEAEIE GYRQQIRLLL GEDCRADEML VSSRILKKTG LRLAQKEERP C