| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_06160 |
|---|
| Symbol | |
|---|
| ID | 4383839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 542843 |
|---|
| End bp | 545236 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639323043 |
|---|
| Product | putative hydroxamate-type ferrisiderophore receptor |
|---|
| Protein accession | YP_788643 |
|---|
| Protein GI | 116054199 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.616824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0240396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCC CGACGTTCCG TCCCGGCCTG CTCGCCCTCG CCATCGCCCT CGCCGTTCCC
GCACCGTTCC TCCACGCCGC CCCGGCCGAA CAGGCCAGCG TGCGCGACTA CCGCATCGCC
GCCGGGCCGC TGGCAGGCAC CCTGAACCGC ATCGCGGCCC AGGCCGGCCT GGTCCTCACC
CTGGACCCGG CGCTCGCCGA AGGACGCAGC GCCCACGCCG TACAAGGTCG CTTCGACGCG
CCCGGCGCAT TGCGCGAAGC GCTCAAGGGC AGCGGCCTGG AGCTGGTGGA AAATGCCGGC
GGCACCTACA GCCTGCGCAA GGTGCCGGAA GACACCCTGT CGTTGCAGGC GATGACGGTC
AGCGGCGCCG AGGAAGACCC ACTGGGGCCG ACCAGCGGCT ACGTGGCCAA GCGCAGCATG
ACCGGGACCA AGACCGATAC GCCGATCCTC GAGACCCCGC GCTCGATCTC GGTGGCGACC
CGCCAGCAGA TGACCGACCG CGCCGTGCAC AACCTCGACG ACGCGGTGCG CTACATGCCC
GGCGTCGTCG CCAGCAGCTT CGGCAGCGAC ACCCGCTCCG ACTGGTTGAA GGTGCGCGGC
TTCAAGCCGA CCCAGTTCCT CGACGGCCTG CCGATGGCGG TCGGCGTCTA CAACAACCCG
AAGCTGGAAA CCTGGAACCT GGAGCGTGTC GCCCTGTTGC GCGGCCCGGC CTCCTCGGTC
TACGGCCAGA CCCCGCCCGG CGGCATGCTC GACATGGTCA GCCTGCGTCC GCAGAACGTC
ACCAGTCACG AGGTGAAGGC CGAGGTCGGC AACTACAACC ACAAGCAGGT CAGCTTCGAC
AGCACCGGCC CGCTCGACGA CGAGGGACGC TTTCTCTATC GCATCTCCGG CGTGGTGCGC
GACAGCAACA CCCAGGTCGA CCATATCGAC GACAAGCGCT ACAACATCGC CCCGAGCCTG
ACCTGGAACA TCGACGACGA CACCAGGCTG ACCTTCCTCG GCCAGTTCAA CCGCGACGAT
ACCGGCATCA CCAGCCAGTT CCTGCCGCTG CGCGGAACCA AGTACGACGC GCCGTTCGGC
AAGGTTTCCC ACCACAAGAA CCTCGGCGAC CCGGACTGGG AATACTACGA CCGCACCTAC
TACTGGCTGG GCTACGCCTT CGAGCGGCGG ATCAACGATG TCTGGCAGTT CCGCCAGAAC
CTGCGTTACC TGCGCAACGA CCTGTCGTTC CAGGCGGTTA CAGCGGGCAC AGCTCATGCC
GACGGCACAC TGGAACGCAG CACCACCTCG GTGGATGAAG ACGTCAGTCA GTTCGTAGTA
GATAACAACT TCCAGGCCGA CTTCGAAACA GGCGCCCTGC GCCACACCCT GCTGCTAGGC
CTGGATCACA ACCGCACCGA CAATCAATAC ACATCAATCT TTGGCAGCGC GCCGCCGAGC
AACGTCAACA ACCCGATCTA CGGCCAGCCG ATCGTCAAAC CGGATCGTTC GACGGCCTTC
TACGACTACA AGCAGAAGAC CTACCAGACC GGCCTCTACG TCCAGGACCA GATCGCCCTC
GACAACTGGC GCCTGACCCT CGGCGGTCGC GAGGACTGGG TGCACACCGG GGCCACCTTC
TACAACAAGG GCGACGCCAC CAATACCAGC CGCGACAAGA AGTTCAGCGG CAACGCGGCG
CTCAGCTACA TCTTCGACAA TGGCGTGGCG CCCTACATCT CCTATGCGGA GTCGTTCCAG
CCCACCACTG GCGCCGATAT GAACAGCACC AGTTCGCTGA AGCCGACCGA AGGCAAGCAA
TGGGAAATCG GTGTGAAGTA CCAGCCGGTG GGCTCCGACT CGCTGTTCAC CGCCGCGGTC
TATGACCTGC GCCAGGAGAA CGTCAGCGTG TCGCAGAACA TAGGCGGCAC GCCGGTCACT
TCGCAGACGG GCGAAGTGAA GGTCTCCGGG ATAGAGCTGG AAGCCACCAG CAACGTCACC
GACAACCTGA AGTTGATCGG CGCCTATAGC TACGCCGACA CCGAAGTGAA AAAAGGCCAG
TACGCAGGCA ACCGCCTGCA ACAGGCGCCG CGCAACCAGG CCTCGCTATG GGCCGACTAC
ACCTGGCACG AGGGTGCGCT GAACGGTTTC AGCGTGGGTG CCGGCGCCCG CTACGTAGGC
TCGACCTACG GCGACCAGGC CAACACCTAC GACGGCTACG CCGGCTCGTA CACCCTGTAC
GACGCCGCCG TGCGCTACGA CCTGGGCCAA TTGAACGGCA GCCTGAAAGG CGTCAGCGTG
GCGGTCAATG CCAACAATCT GTTCAACAAG GACTACCTGG CGTCCTGCGA CGGCTACTAC
TGCTACTACG GCGACCAGCG CAGCGTGGTG GGCAGCGTCA GCTACAAGTG GTGA
|
|---|
| Protein sequence | MPRPTFRPGL LALAIALAVP APFLHAAPAE QASVRDYRIA AGPLAGTLNR IAAQAGLVLT
LDPALAEGRS AHAVQGRFDA PGALREALKG SGLELVENAG GTYSLRKVPE DTLSLQAMTV
SGAEEDPLGP TSGYVAKRSM TGTKTDTPIL ETPRSISVAT RQQMTDRAVH NLDDAVRYMP
GVVASSFGSD TRSDWLKVRG FKPTQFLDGL PMAVGVYNNP KLETWNLERV ALLRGPASSV
YGQTPPGGML DMVSLRPQNV TSHEVKAEVG NYNHKQVSFD STGPLDDEGR FLYRISGVVR
DSNTQVDHID DKRYNIAPSL TWNIDDDTRL TFLGQFNRDD TGITSQFLPL RGTKYDAPFG
KVSHHKNLGD PDWEYYDRTY YWLGYAFERR INDVWQFRQN LRYLRNDLSF QAVTAGTAHA
DGTLERSTTS VDEDVSQFVV DNNFQADFET GALRHTLLLG LDHNRTDNQY TSIFGSAPPS
NVNNPIYGQP IVKPDRSTAF YDYKQKTYQT GLYVQDQIAL DNWRLTLGGR EDWVHTGATF
YNKGDATNTS RDKKFSGNAA LSYIFDNGVA PYISYAESFQ PTTGADMNST SSLKPTEGKQ
WEIGVKYQPV GSDSLFTAAV YDLRQENVSV SQNIGGTPVT SQTGEVKVSG IELEATSNVT
DNLKLIGAYS YADTEVKKGQ YAGNRLQQAP RNQASLWADY TWHEGALNGF SVGAGARYVG
STYGDQANTY DGYAGSYTLY DAAVRYDLGQ LNGSLKGVSV AVNANNLFNK DYLASCDGYY
CYYGDQRSVV GSVSYKW
|
|---|
| |