| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_05840 |
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| Symbol | gcdH |
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| ID | 4383816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 515998 |
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| End bp | 517179 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639323020 |
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| Product | glutaryl-CoA dehydrogenase |
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| Protein accession | YP_788620 |
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| Protein GI | 116054176 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA AAGCTAGCTT CAACTGGGAA GATCCCCTGC TGCTGGACCA GCAGCTCACC
GAAGAAGAGC GCATGGTTCG CGACAGCGCC CAGCAGTTCG CCCAGGACAA GCTGGCCCCG
CGCGTGCTCG AAGCCTTCCG CCACGAACAG ACCGACCCGA AGATCTTCCG CGAGATGGGC
GAGACCGGCC TGCTCGGCGC GACCATTCCC GAAGCCTACG GCGGCAGCGG CCTCAACTAC
GTCTGCTATG GCCTGATCGC TCGCGAAGTC GAGCGCGTCG ACTCCGGCTA TCGCTCGATG
ATGAGCGTGC AGTCCTCGCT GGTGATGGTG CCAATCCATG AATTCGGCAA CGAAGCCACC
CGGCAGAAGT ACCTGCCCAA GCTGGCCAGC GGCGAATACA TCGGCTGCTT CGGCCTGACC
GAGCCGAACC ACGGTTCCGA CCCGGGCTCG ATGGTCACCC GGGCGAAGAA GGTCGACGGC
GGCTATCGCC TGAGCGGCAG CAAGATGTGG ATCACCAACA GCCCGATCGC CGACGTCTTC
GTGGTCTGGG CCAAGGACGA CGAAGGGCAG ATCCGCGGTT TCGTCCTCGA GAAGGGCTGG
GAAGGCCTGA GCGCCCCGGC GATCCATGGC AAGGTCGGCC TGCGCGCCTC GATCACCGGC
GAGATCGTGA TGGACAACGT GTTCGTTCCG GAAGAGAACG CCTTCCCCGA GGTGCGCGGC
CTGCGCGGTC CGTTCACCTG CCTGAACTCG GCGCGCTACG GCATCTCCTG GGGCGCCCTG
GGCGCCGCCG AATTCTGCTG GCACACCGCC CGCCAGTACG TGCTCGACCG CCAGCAGTTC
GGCCGCCCGC TGGCCGCCAA CCAACTGATC CAGAAGAAGC TGGCCGACAT GCAGACCGAG
ATCACCCTGG CCCTGCAAGG CTGCCTGCGC CTGGGGCGGA TGAAGGACGA AGGCACCGCG
GCGGTGGAAA TCACCTCGAT CATGAAGCGC AACAGCTGCG GCAAGGCCCT CGACATCGCC
CGCCTGGCCC GCGACATGCT GGGCGGCAAC GGCATCTCCG ACGAGTTCGG CATCGCCCGC
CACCTGGTCA ACCTGGAAGT GGTGAACACC TACGAGGGCA CCCACGATGT CCACGCGCTG
ATCCTCGGCC GCGCGCAGAC CGGCATCCAG GCATTCTTCT GA
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| Protein sequence | MATKASFNWE DPLLLDQQLT EEERMVRDSA QQFAQDKLAP RVLEAFRHEQ TDPKIFREMG
ETGLLGATIP EAYGGSGLNY VCYGLIAREV ERVDSGYRSM MSVQSSLVMV PIHEFGNEAT
RQKYLPKLAS GEYIGCFGLT EPNHGSDPGS MVTRAKKVDG GYRLSGSKMW ITNSPIADVF
VVWAKDDEGQ IRGFVLEKGW EGLSAPAIHG KVGLRASITG EIVMDNVFVP EENAFPEVRG
LRGPFTCLNS ARYGISWGAL GAAEFCWHTA RQYVLDRQQF GRPLAANQLI QKKLADMQTE
ITLALQGCLR LGRMKDEGTA AVEITSIMKR NSCGKALDIA RLARDMLGGN GISDEFGIAR
HLVNLEVVNT YEGTHDVHAL ILGRAQTGIQ AFF
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