Gene PA14_05530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_05530 
SymbolmexA 
ID4384293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp486775 
End bp487926 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content67% 
IMG OID639322999 
ProductRND multidrug efflux membrane fusion protein MexA precursor 
Protein accessionYP_788599 
Protein GI116054156 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAA CGCCAGCCAT GCGTGTACTG GTTCCGGCCC TGCTGGTCGC GATTTCGGCC 
CTTTCCGGGT GCGGAAAAAG CGAGGCGCCG CCGCCGGCGC AAACGCCGGA GGTCGGAATC
GTGACCCTGG AAGCGCAGAC GGTGACCCTG AATACCGAGC TGCCGGGCCG GACCAATGCG
TTCCGCATCG CCGAGGTGCG TCCCCAGGTG AACGGCATCA TCCTCAAGCG CCTGTTCAAG
GAAGGCAGCG ACGTCAAGGC CGGGCAGCAG CTCTACCAGA TCGACCCCGC CACCTACGAG
GCCGACTACC AGAGCGCCCA GGCCAACCTG GCCTCGACCC AGGAGCAGGC CCAGCGCTAC
AAGCTGCTGG TCGCCGACCA GGCCGTGAGC AAGCAGCAGT ACGCCGACGC CAATGCCGCC
TACCTGCAGT CCAAGGCGGC GGTGGAACAG GCGCGGATCA ACCTGCGCTA CACCAAGGTG
CTGTCGCCGA TCTCCGGCCG CATCGGCCGT TCCGCGGTGA CCGAAGGCGC CCTGGTGACC
AACGGCCAGG CCAACGCGAT GGCCACCGTG CAACAGCTCG ACCCGATCTA CGTCGACGTC
ACCCAGCCGT CCACCGCCCT GCTGCGCCTG CGCCGCGAAC TGGCCAGCGG CCAGTTGGAG
CGCGCCGGCG ACAACGCTGC GAAGGTCTCC CTGAAGCTGG AGGACGGTAG CCAATACCCG
CTGGAAGGCC GCCTCGAATT CTCCGAGGTT TCCGTCGACG AAGGCACCGG CTCGGTCACC
ATCCGCGCCG TGTTCCCCAA CCCGAACAAC GAGCTGCTGC CCGGCATGTT CGTTCACGCG
CAGTTGCAGG AAGGCGTCAA GCAGAAGGCC ATCCTCGCTC CGCAGCAAGG CGTGACCCGC
GACCTCAAGG GCCAGGCTAC CGCGCTGGTG GTGAACGCGC AGAACAAGGT CGAGCTGCGG
GTGATCAAGG CCGACCGGGT GATCGGCGAC AAGTGGCTGG TCACCGAAGG CCTGAACGCC
GGCGACAAGA TCATTACCGA AGGCCTGCAG TTCGTGCAGC CGGGTGTCGA GGTGAAGACC
GTGCCGGCGA AGAATGTCGC GTCCGCGCAG AAGGCCGACG CCGCTCCGGC GAAAACCGAC
AGCAAGGGCT GA
 
Protein sequence
MQRTPAMRVL VPALLVAISA LSGCGKSEAP PPAQTPEVGI VTLEAQTVTL NTELPGRTNA 
FRIAEVRPQV NGIILKRLFK EGSDVKAGQQ LYQIDPATYE ADYQSAQANL ASTQEQAQRY
KLLVADQAVS KQQYADANAA YLQSKAAVEQ ARINLRYTKV LSPISGRIGR SAVTEGALVT
NGQANAMATV QQLDPIYVDV TQPSTALLRL RRELASGQLE RAGDNAAKVS LKLEDGSQYP
LEGRLEFSEV SVDEGTGSVT IRAVFPNPNN ELLPGMFVHA QLQEGVKQKA ILAPQQGVTR
DLKGQATALV VNAQNKVELR VIKADRVIGD KWLVTEGLNA GDKIITEGLQ FVQPGVEVKT
VPAKNVASAQ KADAAPAKTD SKG