Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_04320 |
Symbol | ilvA1 |
ID | 4383736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 386260 |
End bp | 387774 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639322901 |
Product | threonine dehydratase |
Protein accession | YP_788501 |
Protein GI | 116054058 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.478208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAC AATACGTCAA GAAGATCCTC ACCTCGCGCG TCTATGACGT CGCGGTGGAA ACGCCCCTGC AACCCGCCCG CCAGTTGTCC GAACGCCTCG GCAACCAGGT CCTGCTCAAG CGCGAGGACC TGCAGCCGGT GTTTTCCTTC AAGATCCGCG GCGCCTACAA CAAGGTCGCG CAGCTCACCG AGGAGGAGAA GGCCCGCGGG GTGATCGCCG CCTCGGCCGG CAACCACGCC CAGGGCCTGG CCCTGGCGGC CAAGCGGCAG GGGATCAGGG CGGTCATCGT GATGCCCAAG ACCACCCCCG AGATCAAGGT CCAGGCGGTG CGCGCCCACG GCGCCAAGGC GGTGCTGCAC GGCGACGCCT TCCCCGAGGC GCTGGCCCAC GCGCTGAAGC TGGTCGACGA GAAGGGCTAC ACCTTCGTCC ATCCCTACGA CGATCCGGAC ACCATCGCCG GCCAGGGCAC CGTGGCCATG GAGATCCTCC GCCAGCAGCC CGGCCGCCTC GATGCGATCT TCGTCCCGGT GGGCGGTGGC GGATTGGTCG CCGGCATCGC CGCCTACGTC AAGTACCTGC GTCCGGAGAT CAAGGTGATC GGCGTCGAGC CGGACGAGTC GAACTGCCTG CAGGCGGCCA TGGCCGCCGG CGAGCGGGTG ATGCTGGGCC AGGTCGGGCT GTTCGCCGAC GGCGTGGCGG TGGCGCAGAT CGGCCAGCAC ACCTTCGACA TCTGCAAGGA CCACGTCGAC GAAGTGATCA CCGTCAGCAC CGACGAGATC TGTGCGGCGA TCAAGGACAT CTACGACGAC ACCCGCTCGA TCACCGAGCC GGCCGGCGCG CTGGCGGTGG CCGGGATCAA GAAGTACGTT GAGCGCGAGC GCGCCGAGGG GCAGACCCTG GTGGCGATCG ACTCCGGCGC CAACGTCAAC TTCGATCGCC TGCGGCATGT CGCCGAACGC GCCGAACTGG GCGAGCGCCG CGAAGCGATC ATCGCGGTGA CCATTCCCGA GCGGCCGGGC AGCTTCAAGG CCTTCTGCGA GGCGGTCGGC AAGCGCCAGA TCACCGAGTT CAACTATCGC TACCACAGCG GCAGCGAGGC GCACATCTTC GTCGGCGTGC AGACCCACCC GGAGAACGAC CCGCGCGAGG CGCTGGTGGC CTATCTGCGC GAGAAGGGCT TCCCGGTCCT CGACCTGACC GACAACGAAC TGGCCAAGCT GCACATCCGC CACATGGTTG GCGGCCATGC AGTGAAAGTC AGCGACGAGA TGGTGTTCCG CTTCGAATTC CCCGAGCGGC CCGGCGCGCT GTTCAACTTC CTCACCAAGC TCGGCGGGCG CTGGAACATC TCGATGTTCC ACTACCGCAA CCATGGCGCG GCCGACGGCC GGGTGGTGGC CGGGTTGCAG GTGCCGGAAG ACGAGCGCCA CCTGATCCCG CAGACCCTGG AGGCGATCGG CTATCCGTAC TGGGACGAGA CCGCCAACCC GGCCTACCAG CTGTTCCTCG GCTGA
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Protein sequence | MLEQYVKKIL TSRVYDVAVE TPLQPARQLS ERLGNQVLLK REDLQPVFSF KIRGAYNKVA QLTEEEKARG VIAASAGNHA QGLALAAKRQ GIRAVIVMPK TTPEIKVQAV RAHGAKAVLH GDAFPEALAH ALKLVDEKGY TFVHPYDDPD TIAGQGTVAM EILRQQPGRL DAIFVPVGGG GLVAGIAAYV KYLRPEIKVI GVEPDESNCL QAAMAAGERV MLGQVGLFAD GVAVAQIGQH TFDICKDHVD EVITVSTDEI CAAIKDIYDD TRSITEPAGA LAVAGIKKYV ERERAEGQTL VAIDSGANVN FDRLRHVAER AELGERREAI IAVTIPERPG SFKAFCEAVG KRQITEFNYR YHSGSEAHIF VGVQTHPEND PREALVAYLR EKGFPVLDLT DNELAKLHIR HMVGGHAVKV SDEMVFRFEF PERPGALFNF LTKLGGRWNI SMFHYRNHGA ADGRVVAGLQ VPEDERHLIP QTLEAIGYPY WDETANPAYQ LFLG
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