Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_04240 |
Symbol | |
ID | 4383730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 379324 |
End bp | 380253 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639322895 |
Product | putative permease of ABC transporter |
Protein accession | YP_788495 |
Protein GI | 116054052 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA CCGGCCGACC TTCCGCGCAA CAGTCGGCCG AACGCCGGCA ACTGCGTCGG CGCCTGCTGC TGAGCAGCCC GGCGATGCTG ATGCTGGTGC TGTTCCTGGT GATCCCGCTA GGCATCATGT TCGCCGTGTC GATCCAGCAG TCCGGCGACT ACGGCGGGGT GAAGTGGGGC CAGCACAGCC TGGAGGCCTA CCTCAATTTC CTCTGGGAAC GCGACCTGGA CGACAGCCTG GTGTTCAACG CCGACTACCT GGGCATCTTC CAGCGCTCGT TCTGGCTGTC GCTGCTGACC ACCCTCGGCT GCCTGGCACT CGGCTTCCCC ACCGCGCTGT ACCTGGCGTT GCAGCCGGAA CGCCGGCGCA ACCTGCTGCT GTTCCTGGTC ACCGTGCCGT TCTGGACCAA CCTGCTGGTG CGGGTCTACG CCTGGATCCT GCTGCTGCGC AACGGCGGGC TGGTGGACGC CGGCCTGCAA GGCATCGGCC TGACCGACAC CGGGCTGGGG CTGCTCTATA CCGATAACGC GGTGATCATC GGCCTCCTTT ATACCTACCT GCCGTTCATG GTGCTGCCGA TCTACACCAG CCTGGAAAAG ATGGACTGGC GCCTGGTGGA GGCGACATTC GACCTCGGCG CCAACCGCTG GAAAGCGCTG CGCCGGGTGA TCGTGCCGCT GGCGATGCCG GGGATAGTCG CCGGCTGCAT CCTGGTATTC ATCCCGGCCC TGGGCAGCTA CATCATTCCG GAATTGCTCG GCGGCGGTAA GGCGCTGATG ATCGGCAACC TGATCCAGCT GCAATTCGGT ACCGCGCACA ACTGGCCCTT CGGCGCCGCC CTTTCGTTCG CCCTGCTGGC CTTCGTCCTG CTGGCGATGC TGATCCACAG CCTGCGCTTC CGGGCCAACG CCGGCGGAGG CCAGCCATGA
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Protein sequence | MSATGRPSAQ QSAERRQLRR RLLLSSPAML MLVLFLVIPL GIMFAVSIQQ SGDYGGVKWG QHSLEAYLNF LWERDLDDSL VFNADYLGIF QRSFWLSLLT TLGCLALGFP TALYLALQPE RRRNLLLFLV TVPFWTNLLV RVYAWILLLR NGGLVDAGLQ GIGLTDTGLG LLYTDNAVII GLLYTYLPFM VLPIYTSLEK MDWRLVEATF DLGANRWKAL RRVIVPLAMP GIVAGCILVF IPALGSYIIP ELLGGGKALM IGNLIQLQFG TAHNWPFGAA LSFALLAFVL LAMLIHSLRF RANAGGGQP
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