Gene PA14_04240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_04240 
Symbol 
ID4383730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp379324 
End bp380253 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID639322895 
Productputative permease of ABC transporter 
Protein accessionYP_788495 
Protein GI116054052 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCGGCCGACC TTCCGCGCAA CAGTCGGCCG AACGCCGGCA ACTGCGTCGG 
CGCCTGCTGC TGAGCAGCCC GGCGATGCTG ATGCTGGTGC TGTTCCTGGT GATCCCGCTA
GGCATCATGT TCGCCGTGTC GATCCAGCAG TCCGGCGACT ACGGCGGGGT GAAGTGGGGC
CAGCACAGCC TGGAGGCCTA CCTCAATTTC CTCTGGGAAC GCGACCTGGA CGACAGCCTG
GTGTTCAACG CCGACTACCT GGGCATCTTC CAGCGCTCGT TCTGGCTGTC GCTGCTGACC
ACCCTCGGCT GCCTGGCACT CGGCTTCCCC ACCGCGCTGT ACCTGGCGTT GCAGCCGGAA
CGCCGGCGCA ACCTGCTGCT GTTCCTGGTC ACCGTGCCGT TCTGGACCAA CCTGCTGGTG
CGGGTCTACG CCTGGATCCT GCTGCTGCGC AACGGCGGGC TGGTGGACGC CGGCCTGCAA
GGCATCGGCC TGACCGACAC CGGGCTGGGG CTGCTCTATA CCGATAACGC GGTGATCATC
GGCCTCCTTT ATACCTACCT GCCGTTCATG GTGCTGCCGA TCTACACCAG CCTGGAAAAG
ATGGACTGGC GCCTGGTGGA GGCGACATTC GACCTCGGCG CCAACCGCTG GAAAGCGCTG
CGCCGGGTGA TCGTGCCGCT GGCGATGCCG GGGATAGTCG CCGGCTGCAT CCTGGTATTC
ATCCCGGCCC TGGGCAGCTA CATCATTCCG GAATTGCTCG GCGGCGGTAA GGCGCTGATG
ATCGGCAACC TGATCCAGCT GCAATTCGGT ACCGCGCACA ACTGGCCCTT CGGCGCCGCC
CTTTCGTTCG CCCTGCTGGC CTTCGTCCTG CTGGCGATGC TGATCCACAG CCTGCGCTTC
CGGGCCAACG CCGGCGGAGG CCAGCCATGA
 
Protein sequence
MSATGRPSAQ QSAERRQLRR RLLLSSPAML MLVLFLVIPL GIMFAVSIQQ SGDYGGVKWG 
QHSLEAYLNF LWERDLDDSL VFNADYLGIF QRSFWLSLLT TLGCLALGFP TALYLALQPE
RRRNLLLFLV TVPFWTNLLV RVYAWILLLR NGGLVDAGLQ GIGLTDTGLG LLYTDNAVII
GLLYTYLPFM VLPIYTSLEK MDWRLVEATF DLGANRWKAL RRVIVPLAMP GIVAGCILVF
IPALGSYIIP ELLGGGKALM IGNLIQLQFG TAHNWPFGAA LSFALLAFVL LAMLIHSLRF
RANAGGGQP