Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_04090 |
Symbol | |
ID | 4383719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 367838 |
End bp | 368608 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639322884 |
Product | putative binding protein component of ABC transporter |
Protein accession | YP_788484 |
Protein GI | 116054041 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATTTC TGCCCCGCCT GCTGATGCTG GTATCCCTGG CCGCCCCGCT GGCCCATGCC GAGCTGCTCG ACGACGTCCA CCAGCGCGGC GCCCTGCGCA TCGCCCTGGA GGGCACCTAT CCGCCGTTCA ACTTCAAGCA GGGCGGCAAG CTCACCGGCT TCGAGACCGA ACTGGGCGAA CTGCTGGCCG CCGAGCTGGA GGTCAAGCCG GAATTCGTCA CCACCGAATG GAGCGGCATC CTCGCCGGCC TGCAGAGCGG CAAGTACGAC ATCGCGCTGA ACCAGGTCTC GGTGAACGAG CAGCGGCGCA AGGTCTTCGA CTTCAGCGAG CCGTACACCA TCTCCAGCGC CCAGTTGATC GTGCGCGCCG ACGACACCCG CCAGTTCAGG TCGCTGGAAG ACCTCAAGGG CCTCAAGCTC GGCGTCGGCC AGGGCACCAA CTACGCCGAC CTGGCGAAGT CGGTGGCCGG CGTCAACGTG CGCACCTATC CGGGCGCCCC GGAATACCTG CAGGACCTGG CCAGCAAACG CATCGACGCG GCGCTCAACG ACCGCCTGCT GATCCCCTTC GCCATCCGCG AGGCCAAGCT CCCGGTCAAG CCCGGCGCGG CGGTGGGACC GGTGGCGAAC ATGGCGATTC CCTACCGGAA GAACAACCCG AAGTTCGGCG AGGCGCTGAA CGCGGCGCTG GAGAAGATCA AGGCCGACGG CCGCTTCGCC AAGCTCTCGG AAAAGTGGTT CGGCCTGGAC GTCAGCCAGC CGCCGAAGTG A
|
Protein sequence | MRFLPRLLML VSLAAPLAHA ELLDDVHQRG ALRIALEGTY PPFNFKQGGK LTGFETELGE LLAAELEVKP EFVTTEWSGI LAGLQSGKYD IALNQVSVNE QRRKVFDFSE PYTISSAQLI VRADDTRQFR SLEDLKGLKL GVGQGTNYAD LAKSVAGVNV RTYPGAPEYL QDLASKRIDA ALNDRLLIPF AIREAKLPVK PGAAVGPVAN MAIPYRKNNP KFGEALNAAL EKIKADGRFA KLSEKWFGLD VSQPPK
|
| |