Gene PA14_04090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_04090 
Symbol 
ID4383719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp367838 
End bp368608 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID639322884 
Productputative binding protein component of ABC transporter 
Protein accessionYP_788484 
Protein GI116054041 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTC TGCCCCGCCT GCTGATGCTG GTATCCCTGG CCGCCCCGCT GGCCCATGCC 
GAGCTGCTCG ACGACGTCCA CCAGCGCGGC GCCCTGCGCA TCGCCCTGGA GGGCACCTAT
CCGCCGTTCA ACTTCAAGCA GGGCGGCAAG CTCACCGGCT TCGAGACCGA ACTGGGCGAA
CTGCTGGCCG CCGAGCTGGA GGTCAAGCCG GAATTCGTCA CCACCGAATG GAGCGGCATC
CTCGCCGGCC TGCAGAGCGG CAAGTACGAC ATCGCGCTGA ACCAGGTCTC GGTGAACGAG
CAGCGGCGCA AGGTCTTCGA CTTCAGCGAG CCGTACACCA TCTCCAGCGC CCAGTTGATC
GTGCGCGCCG ACGACACCCG CCAGTTCAGG TCGCTGGAAG ACCTCAAGGG CCTCAAGCTC
GGCGTCGGCC AGGGCACCAA CTACGCCGAC CTGGCGAAGT CGGTGGCCGG CGTCAACGTG
CGCACCTATC CGGGCGCCCC GGAATACCTG CAGGACCTGG CCAGCAAACG CATCGACGCG
GCGCTCAACG ACCGCCTGCT GATCCCCTTC GCCATCCGCG AGGCCAAGCT CCCGGTCAAG
CCCGGCGCGG CGGTGGGACC GGTGGCGAAC ATGGCGATTC CCTACCGGAA GAACAACCCG
AAGTTCGGCG AGGCGCTGAA CGCGGCGCTG GAGAAGATCA AGGCCGACGG CCGCTTCGCC
AAGCTCTCGG AAAAGTGGTT CGGCCTGGAC GTCAGCCAGC CGCCGAAGTG A
 
Protein sequence
MRFLPRLLML VSLAAPLAHA ELLDDVHQRG ALRIALEGTY PPFNFKQGGK LTGFETELGE 
LLAAELEVKP EFVTTEWSGI LAGLQSGKYD IALNQVSVNE QRRKVFDFSE PYTISSAQLI
VRADDTRQFR SLEDLKGLKL GVGQGTNYAD LAKSVAGVNV RTYPGAPEYL QDLASKRIDA
ALNDRLLIPF AIREAKLPVK PGAAVGPVAN MAIPYRKNNP KFGEALNAAL EKIKADGRFA
KLSEKWFGLD VSQPPK