Gene PA14_03930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_03930 
SymbolspuE 
ID4383705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp354084 
End bp355181 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content62% 
IMG OID639322870 
Productpolyamine transport protein 
Protein accessionYP_788470 
Protein GI116054027 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACATT CCATTGGCAA GACACTGCTG GTAGCCGCTC TGGCTACGGC GATCGCGGGC 
CCCGTGCAGG CGGAGAAGAA GAGCCTGCAC ATCTATAACT GGACCGATTA CATCGCTCCC
ACCACCCTCA AGGACTTCAC CAAGGAGAGC GGGATCGACG TCAGCTACGA CGTCTTCGAC
TCCAACGAGA CCCTCGAGGG CAAGCTGGTC TCCGGCCACT CCGGCTATGA CATCGTGGTG
CCGTCGAACA ACTTCCTCGG CAAGCAGATC CAGGCCGGTG CCTTCCAGAA GCTGGACAAG
AGCAAGCTGC CGAACTGGAA GAACCTCGAT CCGGCGCTGC TCAAGCAACT GGAGGTCAGC
GACCCGGGCA ACCAGTACGC GGTTCCCTAC CTGTGGGGCA CCAACGGCAT CGGTTACAAC
GTGGCCAAGG TCAAGGAAGT CCTCGGCGAC CAGCCGATCG ACTCCTGGGC CATCCTCTTC
GAGCCGGAGA ACATGAAGAA GCTCGCCAAG TGCGGCGTAG CCTTCATGGA CAGCGGCGAC
GAGATGCTGC CCGCCGCCCT CAACTACCTG GGGCTGGACC CCAACACCCA CGACCCGAAG
GACTACAAGA AGGCCGAGGA AGTCCTGACC AAGGTTCGCC CCTACGTCAG CTACTTCCAC
TCCTCCAAGT ACATCTCCGA CCTGGCCAAC GGCAACATCT GCGTCGCCTT CGGCTATTCC
GGGGACGTCT TCCAGGCCGC TGCCCGCGCC GAAGAGGCCG GCAAGGGCAT CGACATCCAG
TACGTGATTC CCAAGGAAGG CGCCAACCTG TGGTTCGACC TGATGGCGAT TCCCGCCGAT
GCCAAGGCCG CCGATAACGC CTATGCGTTC ATCGACTACC TGCTGCGTCC GGAGGTGATC
GCCAAGGTCA GCGACTACGT CGGCTACGCC AACGCGATAC CGGGGGCCCG CCCGCTGATG
GACAAGAGCG TCAGCGACAG CGAGGAGGTG TATCCGCCGC AGGCCGTGCT CGACAAGCTC
TACGTTTCCG CCGTGTTGCC GGCCAAGGTG CTGCGCCTGC AGACCCGTAC CTGGACCCGG
ATCAAGACCG GCAAATAA
 
Protein sequence
MQHSIGKTLL VAALATAIAG PVQAEKKSLH IYNWTDYIAP TTLKDFTKES GIDVSYDVFD 
SNETLEGKLV SGHSGYDIVV PSNNFLGKQI QAGAFQKLDK SKLPNWKNLD PALLKQLEVS
DPGNQYAVPY LWGTNGIGYN VAKVKEVLGD QPIDSWAILF EPENMKKLAK CGVAFMDSGD
EMLPAALNYL GLDPNTHDPK DYKKAEEVLT KVRPYVSYFH SSKYISDLAN GNICVAFGYS
GDVFQAAARA EEAGKGIDIQ YVIPKEGANL WFDLMAIPAD AKAADNAYAF IDYLLRPEVI
AKVSDYVGYA NAIPGARPLM DKSVSDSEEV YPPQAVLDKL YVSAVLPAKV LRLQTRTWTR
IKTGK