Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_03930 |
Symbol | spuE |
ID | 4383705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 354084 |
End bp | 355181 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639322870 |
Product | polyamine transport protein |
Protein accession | YP_788470 |
Protein GI | 116054027 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACATT CCATTGGCAA GACACTGCTG GTAGCCGCTC TGGCTACGGC GATCGCGGGC CCCGTGCAGG CGGAGAAGAA GAGCCTGCAC ATCTATAACT GGACCGATTA CATCGCTCCC ACCACCCTCA AGGACTTCAC CAAGGAGAGC GGGATCGACG TCAGCTACGA CGTCTTCGAC TCCAACGAGA CCCTCGAGGG CAAGCTGGTC TCCGGCCACT CCGGCTATGA CATCGTGGTG CCGTCGAACA ACTTCCTCGG CAAGCAGATC CAGGCCGGTG CCTTCCAGAA GCTGGACAAG AGCAAGCTGC CGAACTGGAA GAACCTCGAT CCGGCGCTGC TCAAGCAACT GGAGGTCAGC GACCCGGGCA ACCAGTACGC GGTTCCCTAC CTGTGGGGCA CCAACGGCAT CGGTTACAAC GTGGCCAAGG TCAAGGAAGT CCTCGGCGAC CAGCCGATCG ACTCCTGGGC CATCCTCTTC GAGCCGGAGA ACATGAAGAA GCTCGCCAAG TGCGGCGTAG CCTTCATGGA CAGCGGCGAC GAGATGCTGC CCGCCGCCCT CAACTACCTG GGGCTGGACC CCAACACCCA CGACCCGAAG GACTACAAGA AGGCCGAGGA AGTCCTGACC AAGGTTCGCC CCTACGTCAG CTACTTCCAC TCCTCCAAGT ACATCTCCGA CCTGGCCAAC GGCAACATCT GCGTCGCCTT CGGCTATTCC GGGGACGTCT TCCAGGCCGC TGCCCGCGCC GAAGAGGCCG GCAAGGGCAT CGACATCCAG TACGTGATTC CCAAGGAAGG CGCCAACCTG TGGTTCGACC TGATGGCGAT TCCCGCCGAT GCCAAGGCCG CCGATAACGC CTATGCGTTC ATCGACTACC TGCTGCGTCC GGAGGTGATC GCCAAGGTCA GCGACTACGT CGGCTACGCC AACGCGATAC CGGGGGCCCG CCCGCTGATG GACAAGAGCG TCAGCGACAG CGAGGAGGTG TATCCGCCGC AGGCCGTGCT CGACAAGCTC TACGTTTCCG CCGTGTTGCC GGCCAAGGTG CTGCGCCTGC AGACCCGTAC CTGGACCCGG ATCAAGACCG GCAAATAA
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Protein sequence | MQHSIGKTLL VAALATAIAG PVQAEKKSLH IYNWTDYIAP TTLKDFTKES GIDVSYDVFD SNETLEGKLV SGHSGYDIVV PSNNFLGKQI QAGAFQKLDK SKLPNWKNLD PALLKQLEVS DPGNQYAVPY LWGTNGIGYN VAKVKEVLGD QPIDSWAILF EPENMKKLAK CGVAFMDSGD EMLPAALNYL GLDPNTHDPK DYKKAEEVLT KVRPYVSYFH SSKYISDLAN GNICVAFGYS GDVFQAAARA EEAGKGIDIQ YVIPKEGANL WFDLMAIPAD AKAADNAYAF IDYLLRPEVI AKVSDYVGYA NAIPGARPLM DKSVSDSEEV YPPQAVLDKL YVSAVLPAKV LRLQTRTWTR IKTGK
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