| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_03920 |
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| Symbol | spuD |
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| ID | 4383704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 352562 |
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| End bp | 353665 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639322869 |
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| Product | polyamine transport protein |
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| Protein accession | YP_788469 |
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| Protein GI | 116054026 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.837862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAAC GTTTCGGTAA GACCCTGCTC GCCCTGACCT TGGCGGGCTC TGTGGCCGGT
ATGGCGCAGG CTGCGGACAA CAAGGTACTG CACGTGTACA ACTGGTCCGA CTACATCGCG
CCGGACACCC TGGAGAAGTT CACCAAGGAA ACCGGGATCA AGGTCGTCTA CGACGTCTAC
GACAGCAACG AAGTGCTGGA AGCCAAGTTG CTGGCGGGCA AGTCCGGGTA CGACGTGGTG
GTGCCGTCCA ACTCCTTCCT CGCCAAGCAG ATCAAGGCCG GGGTCTACCA GAAGCTCGAC
AAGTCCAAGC TGCCGAACTG GAAGAACCTG AACAAGGACC TGATGCACAC CCTGGAAGTC
AGCGACCCGG GCAACGAGCA TGCGATTCCC TACATGTGGG GCACCATCGG CATCGGCTAC
AACCCGGACA AGGTCAAGGC GGCCTTCGGC GACAATGCGC CGGTGGATTC CTGGGACCTG
GTATTCAAGC CGGAGAACAT CCAGAAGCTG AAGCAGTGCG GCGTCAGCTT CCTCGACTCG
CCGACCGAGA TTCTCCCGGC GGCCCTGCAC TATCTCGGCT ACAAGCCGGA CACCGACAAT
CCCAAGGAAC TCAAGGCGGC CGAAGAGCTG TTCCTGAAGA TCCGTCCCTA CGTCACCTAC
TTCCACTCGT CGAAGTACAT TTCCGACCTG GCCAACGGCA ACATCTGCGT CGCCATCGGC
TACTCCGGCG ACATCTACCA GGCCAAGTCC CGCGCCGAAG AGGCGAAGAA CAAGGTCACC
GTCAAGTACA ACATTCCCAA GGAAGGCGCC GGCAGCTTCT TCGACATGGT CGCCATTCCC
AAGGACGCCG AGAACACCGA GGGCGCCCTG GCCTTCGTCA ACTTCCTGAT GAAGCCGGAA
ATCATGGCCG AGATCACCGA CGTGGTTCAG TTCCCCAACG GCAACGCAGC GGCCACCCCG
CTGGTGTCCG AGGCGATCCG CAACGACCCG GGCATCTACC CGAGCGAAGA GGTCATGAAG
AAGCTGTATA CCTTCCCCGA CCTGCCGGCC AAGACCCAGC GGGCGATGAC CCGCAGCTGG
ACCAAGATCA AGTCCGGCAA GTGA
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| Protein sequence | MMKRFGKTLL ALTLAGSVAG MAQAADNKVL HVYNWSDYIA PDTLEKFTKE TGIKVVYDVY
DSNEVLEAKL LAGKSGYDVV VPSNSFLAKQ IKAGVYQKLD KSKLPNWKNL NKDLMHTLEV
SDPGNEHAIP YMWGTIGIGY NPDKVKAAFG DNAPVDSWDL VFKPENIQKL KQCGVSFLDS
PTEILPAALH YLGYKPDTDN PKELKAAEEL FLKIRPYVTY FHSSKYISDL ANGNICVAIG
YSGDIYQAKS RAEEAKNKVT VKYNIPKEGA GSFFDMVAIP KDAENTEGAL AFVNFLMKPE
IMAEITDVVQ FPNGNAAATP LVSEAIRNDP GIYPSEEVMK KLYTFPDLPA KTQRAMTRSW
TKIKSGK
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