| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_03800 |
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| Symbol | oprE |
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| ID | 4383696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 341437 |
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| End bp | 342828 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639322860 |
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| Product | anaerobically-induced outer membrane porin OprE precursor |
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| Protein accession | YP_788460 |
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| Protein GI | 116054018 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.314855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.413921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGTC GCAAGATCAA CAAGTCACGA CTGGCCCTGG CCATCACTGC CGGTACCCTC
GGTGCCCTGG CGCAACAGGC GGTCGCCGCC GGTTTCATCG AGGACAGCAA GGCATCGCTG
ACCCTGCGCA ACTTCTACAT CAATACCGAC AACCGCAATG GCAGCGCCTC GCCGAGCAAG
CAGGAAGAGT GGGGCCAGGG CTTCATCCTG AATTACCAGT CGGGCTTCAC CCAGGGCACC
GTCGGCTTCG GCGTCGACGC GCTGGGCCTG CTCGGCGTGC GCCTGGACGG CGGCGGCCGT
GCCGGCAAGA GCGGCCTGGG CCTGGACCGC CAGCCGGGCA CCGTGTTCCC GCTGGAAAGC
AACGGTGAGC CGGTGCACGA CTTCGCCAGC CTGGGCCTGA CCGCCAAGGC CAAGGTATCC
AACACCGAGT TCCGCTATGG CACCCTGCAG CCGAAGCTGC CGGTGGTCAC CTACAACGAC
GGCCGCCTGC TGCCGGTCAC CTTCGAGGGC GGCCAGGTCA CCTCGACCGA CCTCAAGGAC
TTCACCCTGG TTGCCGGCCA ACTGGAACAC TCCAAGGGCC GTAACTCCAC CGACAACCGC
AGCCTGAGCA TCGCCGGCGC CAACGGCAGC AGCGCCGGCT CGCGCGACAG CAACAAGTTC
TACTACGCGG GTGGCGACTA CAAGGTCAAC AAGGACCTGA CCCTGCAGTA CTACTACGGC
AACCTGGACG ACTTCTACAA GCAGCACTTC CTCGGCCTGA TCCACAACTG GCAGATCGGC
CCGGGCGTCC TGAAGACCGA CCTGCGCGCC TTCGACAGCA GCTCCGACGG CAAGAACGGC
AGCCGTTCCG GCCGTGCCGA CGGCTACGTC AGCAGCGGCT ACTACGGCAG CGGCGTGACC
AAGGGCGAAG TCGACAACCG CGCCTTCAGC GGTCTCTTCA CCTATACCGT CAGCGGCCAC
AGCATCGGCG CCGGTTACCA GATCCTCAAC GGCGACAGCG ACTTCCCGTT CCTGAACCGT
GGCGATGGCG AAGGTTCCAC CGCGTACCTG ATCACCGACG TGCAGATCGG CAAATTCCAG
CGCGCCGGCG AGCGCACCTG GCAGGTCCGC TACGGCTACG ACTTCGCTGG CCTCGGCCTG
CCGGGCCTGA CCTTCAACAC CATGTACCTC AAGGGCGACA ACATCAAGTC CGGGCGCGGC
GACCAGAGCG AGTGGGAGCG TGACATCGCC CTAGCCTATG TGATCCCGGA CGGTACCTTC
AAAGGGCTGG GCTTCACCTG GAAGAACGCT TCGTTCCGCA CCGGTCTGCC GGTGTCCGGC
TCGGGCACTG CGACCCAGCG CGACCAGGAC GAGAACCGCC TGATCGTCAG CTACACCCTG
CCGCTGCTGT AA
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| Protein sequence | MKSRKINKSR LALAITAGTL GALAQQAVAA GFIEDSKASL TLRNFYINTD NRNGSASPSK
QEEWGQGFIL NYQSGFTQGT VGFGVDALGL LGVRLDGGGR AGKSGLGLDR QPGTVFPLES
NGEPVHDFAS LGLTAKAKVS NTEFRYGTLQ PKLPVVTYND GRLLPVTFEG GQVTSTDLKD
FTLVAGQLEH SKGRNSTDNR SLSIAGANGS SAGSRDSNKF YYAGGDYKVN KDLTLQYYYG
NLDDFYKQHF LGLIHNWQIG PGVLKTDLRA FDSSSDGKNG SRSGRADGYV SSGYYGSGVT
KGEVDNRAFS GLFTYTVSGH SIGAGYQILN GDSDFPFLNR GDGEGSTAYL ITDVQIGKFQ
RAGERTWQVR YGYDFAGLGL PGLTFNTMYL KGDNIKSGRG DQSEWERDIA LAYVIPDGTF
KGLGFTWKNA SFRTGLPVSG SGTATQRDQD ENRLIVSYTL PLL
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