| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_03200 |
|---|
| Symbol | |
|---|
| ID | 4383671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 282565 |
|---|
| End bp | 284715 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639322812 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_788413 |
|---|
| Protein GI | 116053973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00162132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00000000000240943 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA GGGTTCGGTC GAGGACGATC GTCTCTGCCC AGTCCATCAC CTTGCCCAAG
GGCGGCGACG TGCACCTGGT GCCGCCTCCG CCCAAGCCTT GCGTGACCAT CGTGGTGCAT
GGCGTCAACG ATCTCGCGGG TTGCTACGAA CGGATCGAGC GAGGGCTCTG CCAGGGGCTC
AACGAACGCC TGGACATGCC GCCGACCTTG CCCGGCGGGC AGGCCAATCC CGGCTACCTG
ACGCCGGCGG GCTACAGCCT GCCGGCGGAC GACGAAGGCA AGGCGGAGAA CCCCGACGCC
GTCTACTACC GGCGCAAGTT CGCCAGTGGC GCCGGCGGGG CCGCCGTACG CAGCGTAGTC
GTACCTTTCT ACTGGGGCTT CCGCGAGGAA GAGCAATACA TCAACAAGAC CGCGGCCCAC
GGCGAATGGC TGGACCGCAA CGGCAACCGG CTGGACAAGT CCGGCACCAA GGAAGGCGGG
CAGTTCGTCA ATGCCACCAC CAACCTGCCG GACATGTGGG GCCAGGGTTT CAACGGCAAG
CTGTTCGGTT TCATCTCGCT GGACTGGTTC GGCGGCACCA TGACCCATCC GCTGTTTTCG
GCGGCAGGGC GCAAGTACAT GGTCCTTGCG GCCATGCGCC TGGCCATGTT GATCAAGATC
ATCCGCAAGC GTTACCCGGA CGACACCATC AATGTCGTCG GGCACAGCCA GGGCACCCTG
TTGACCCTGC TGGCACATGC CTTCCTCAAG GATGACGGCG TGGCGCCGGC GGACGGGGTG
ATCATGCTCA ACTCACCCTA CGGCCTGTTC GAACCCCTCA ACGAGAAGCT CCAGGGCTGG
AGCAGCCAGC AGACCAGAGA GGCGCGGCTG GCCACGCTCA AAGGCATCCT CGAGTTCATC
TGCGGCCGGC GCCATCCGGT CCCCGCGCTG AGCAGCGTCG CGTTGCGCAA CTGCCAAGGC
TACGGCGCGA TAGGCGGTCC CGGCTGGGTG GGTGGCCTGG GCTGCCAGAC GACCATCGAC
GGGGAACGGC TCAGCTTCGA TGAGCGCGAC AATCGCGGCA GTGTCTACCT GTATTTCACG
CCCCAGGACC AGACGGTGGG ACTTGCCAAC GTCCAGGGTA TCGGCTGGCG CGGCATTGCT
GAGCAGGTCA AGGGGCTCCC GGGAAGGACC GGGCTGCCGC AGGGTTTTCA CCAGCGCATC
TTCACCGTAC GCAAGCGCAA TGGCGAGAAG GAAAAGATCG GCGGGCACGC CCCTCCCCAT
GTCTACCCTC TTCTGCTGGC CGGCGAGAAG ACCTGGGAAG ACACCGGGCT GGGCGGCAAG
GACAGATTCG GCCGGGCGAA CTTCGACCAG GGCGACAGCG TGCTGCTGAC CGCGCCGCGT
CTGCCGTTGC CGACGGAAGC GCGATTCGAT TTCGACGGAA CCGTCACGGC GCCGGGAGAG
AACTCCGCCA GCGGCGTCTA TCAGGTGCGC GATACCCTCG ATCCGATCGA CGCCGCCATC
GGCGTAAGCA ACGGCGGCTG GAAGGAAAAG GACAGCGGGC ATGCCGTCGC GCAACAGGTG
GACACCGCGC TGGCGTACCG CTACGGGCGC GACACGCGCA GCGTGGAGAG GGCGTTGAAC
GAAGGCAAGG AACTGGCCCG GCAGACCCAT GTGTTTTCCG CTCGTGAACT GGGCACCGGC
ATGGTTCTGG TCACCCGCGC GGAAACTCCC TACGAGGCCC GGCTGCGCCT GCAGACGGCG
GAGGGCCATC TGGAGCCCTT GTCGTTCCAC TCGGCCATAC CCAACAACCC GGAGCATAAC
CGGCGGGTAC TGGCCTATGA CCTGGCCATC GGGGCCGGGG ACAGCGTGGA TGATGTGGTT
TTCTATCAGT ATCTGTGTCG AGTGGCGGAT TGGCGGTTGG ATTGGAAGGC TAAGGACAAG
GGGCTAAATG GCCAAGCAAA TGACGAAATA CATATTCCGA GCGAAGAGGT GCAAGCGTTG
TATCACGCGG AAGAGCCTAA AAATAGCGAG CTAATAGACG CCACTGTAGT CTACCGCAAG
AGTGGCAAAC TCCCTGTGAC AGTAGGAGAC AGCCTGCCTT CCTTGGTGGC GACACAAACC
ATCGAAGACC GCTATTACAG CCGGCCGGTG CGTTTTGGAG GAGCGAGCTG A
|
|---|
| Protein sequence | MNDRVRSRTI VSAQSITLPK GGDVHLVPPP PKPCVTIVVH GVNDLAGCYE RIERGLCQGL
NERLDMPPTL PGGQANPGYL TPAGYSLPAD DEGKAENPDA VYYRRKFASG AGGAAVRSVV
VPFYWGFREE EQYINKTAAH GEWLDRNGNR LDKSGTKEGG QFVNATTNLP DMWGQGFNGK
LFGFISLDWF GGTMTHPLFS AAGRKYMVLA AMRLAMLIKI IRKRYPDDTI NVVGHSQGTL
LTLLAHAFLK DDGVAPADGV IMLNSPYGLF EPLNEKLQGW SSQQTREARL ATLKGILEFI
CGRRHPVPAL SSVALRNCQG YGAIGGPGWV GGLGCQTTID GERLSFDERD NRGSVYLYFT
PQDQTVGLAN VQGIGWRGIA EQVKGLPGRT GLPQGFHQRI FTVRKRNGEK EKIGGHAPPH
VYPLLLAGEK TWEDTGLGGK DRFGRANFDQ GDSVLLTAPR LPLPTEARFD FDGTVTAPGE
NSASGVYQVR DTLDPIDAAI GVSNGGWKEK DSGHAVAQQV DTALAYRYGR DTRSVERALN
EGKELARQTH VFSARELGTG MVLVTRAETP YEARLRLQTA EGHLEPLSFH SAIPNNPEHN
RRVLAYDLAI GAGDSVDDVV FYQYLCRVAD WRLDWKAKDK GLNGQANDEI HIPSEEVQAL
YHAEEPKNSE LIDATVVYRK SGKLPVTVGD SLPSLVATQT IEDRYYSRPV RFGGAS
|
|---|
| |