| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_02790 |
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| Symbol | pcaF |
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| ID | 4383639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 247259 |
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| End bp | 248464 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639322778 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_788379 |
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| Protein GI | 116053941 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0219063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG AGGTATTCAT CTGCGATGCC GTGCGCACGC CGATCGGCCG TTTCGGCGGC
AGTCTTTCCG CGGTGCGCGC CGACGACCTC GCGGCGGTGC CGCTGAAGGC CCTGGTCGAG
CGCAACCCGG GGGTCGACTG GTCGGCGCTG GACGAGGTGT TCCTCGGCTG CGCCAACCAG
GCCGGCGAGG ACAACCGTAA CGTGGCGCGC ATGGCGCTGC TGCTGGCCGG TTTGCCGGAG
AGCGTGCCCG GCGTCACCCT CAACCGCCTC TGCGCCTCGG GGATGGACGC CATCGGCACG
GCGTTCCGCG CCATCGCCTG CGGCGAGATG GAGCTGGCCA TCGCCGGCGG CGTCGAGTCG
ATGTCGCGCG CGCCGTACGT GATGGGCAAG GCCGATAGCG CCTTCGGGCG CGGCCAGAAG
ATCGAGGACA CCACCATCGG CTGGCGCTTC GTCAACCCGC TGATGAAGGA GCAGTACGGC
ATCGACCCGA TGCCGCAGAC CGCCGACAAC GTCGCCGACG ACTATCGCGT GTCGCGTGCC
GACCAGGATG CCTTCGCCCT GCGCAGCCAG CAGCGCGCCG GCAGGGCGCA GGCGGCCGGT
TTCTTCGCCG AGGAAATCGT CCCGGTGACG ATTCGCGGGC GCAAGGGCGA CACCCTGGTC
GAGTACGACG AGCATCCGCG TCCCGACACC ACCCTGGAGG CGCTGGCCCG GCTCAAGCCG
GTCAACGGGC CGGAGAAGAC CGTCACCGCC GGCAACGCGT CCGGGGTCAA CGACGGCGCC
GCCGCGCTGG TCCTGGCCTC CGCCGAGGCA GTGGAGAAGC ACGGCCTGAC TCCGCGCGCG
CGGGTGCTGG GCATGGCCAG CGCCGGCGTC GCCCCACGGA TCATGGGCAT CGGCCCGGTG
CCGGCGGTGC GCAAGCTGCT GCGGCGCCTG GACCTGGCGA TCGACGCCTT CGACGTGATC
GAACTCAACG AAGCCTTCGC CAGCCAGGGC CTGGCCTGCC TGCGCGAACT GGGCGTGGCC
GACGACAGTG AGAAGGTCAA CCCGAACGGC GGTGCCATCG CCCTCGGCCA CCCGCTGGGG
ATGAGCGGTG CGCGGCTGGT CCTCACCGCG CTCCATCAAC TTGAGAAGAG CGGCGGCCGG
CGCGGCCTGG CGACCATGTG CGTAGGCGTC GGCCAAGGCC TGGCGCTGGC CATCGAGCGG
GTCTGA
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| Protein sequence | MSREVFICDA VRTPIGRFGG SLSAVRADDL AAVPLKALVE RNPGVDWSAL DEVFLGCANQ
AGEDNRNVAR MALLLAGLPE SVPGVTLNRL CASGMDAIGT AFRAIACGEM ELAIAGGVES
MSRAPYVMGK ADSAFGRGQK IEDTTIGWRF VNPLMKEQYG IDPMPQTADN VADDYRVSRA
DQDAFALRSQ QRAGRAQAAG FFAEEIVPVT IRGRKGDTLV EYDEHPRPDT TLEALARLKP
VNGPEKTVTA GNASGVNDGA AALVLASAEA VEKHGLTPRA RVLGMASAGV APRIMGIGPV
PAVRKLLRRL DLAIDAFDVI ELNEAFASQG LACLRELGVA DDSEKVNPNG GAIALGHPLG
MSGARLVLTA LHQLEKSGGR RGLATMCVGV GQGLALAIER V
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