| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_02370 |
|---|
| Symbol | |
|---|
| ID | 4383587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 212285 |
|---|
| End bp | 213643 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639322744 |
|---|
| Product | putative porin |
|---|
| Protein accession | YP_788345 |
|---|
| Protein GI | 116053908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000471352 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATC TCAGACGCGC TGTATTCGCC GGCCTGGTCG CCGGCACGCT TTCCGAAGGG
GCGGCCGCGA CGGCCGGGGA TGGGGGCTTC GTCGAGGACA GCGAACTGCA GTTCCTCGCC
CGCACCTACT ACTTCAACCG CGACTACCGC GACAGCCCGA ACAACGCCGG GCGCAACCGC
TTCAAGCCCA GGAGCGAGCG CAACGGCTAC CGCGAGGAAA CCACCCAGGG CCTGCGCCTC
CAGTTCGCCT CCGGCTACAC GCCGGGCAGC CTCGGCTTCG GCCTCGACGC CCATGCCATG
CTCGGCCTGC AACTGGACAG CGGCGGCGGC CGCACCGGCA CCGGCAACCT GCCGGTCGGC
GCCGACGGCC ATCCCGACCA TCGCTACGGC AAGGTCGGCG GCGCCCTCAG GCTACGCCAC
GGCGAAACCC GCCTGAAGTA CGGCCAGACC ACCACCAGCG CGCCGGTGTT CGCCGCCAGC
AGCAACCGCA CGCTGTCCGG CATGGCCTAC GGCCTGCTGC TGGAGGATCG CTCGTTCGAC
GGGCTGCTGC TCGAGGGCGG GCGCTTCACC GCCGCCTCCG GCCCCGGCGA ATCCAAGGTC
CGTGGCGACA TCAGCACCGT CTACGGACGC CTCGGCGCCT ATCCGGTGCG CCTCGACGCG
GTCGGCTTCC TCGGCGGTCA ATGGCAGGCC ACGGAGCGGC TGCAACTGTC GCTCTACGCC
TCGCGCTTCG ACGACATCTG GCAGCAGGCC TATTTCGGCG CCAGCCATCG CCAGCCGCTG
GGCGGGGAGC GCGCGCTGCG GGTCGACCTC GACGCCTACC GCACCCGCGA CAGCGGCCAG
AGCCGCTTCG GCCGCATCGA CACCCTGGCC AGCTCCCTGG CCCTGGGCTA CGAACAGGGA
CCGCAGCGCA TCACCCTGGC CTACCAGCGT GTCCACGGCG AGCAGCCGTT CGACTACATG
GCCTTCGGCG ACGGGCGCTC CAGCGCATCC ATGGTACTGG CCAACTCGGT GGGCTACTCC
GACTTCAACG GACCGGGCGA GCGTTCCTGG CAATTACGCT ATGACCTGGA CCTCGGCGCG
CTCGGCCTGC CTGGGCTCAG CCTGCACGCG CTGCATGCCC GCGGCCGTGC CGGGGCCAGC
GCCAGCAGCG CCGCCGAGAG CATCTACGCC GGACTCTACG GGCGTGACGG GCGGCACCGG
GAAAGCGACC TCGGCTTCGC CTACCGGGTC AAGGCGGGCC CCCTCGCCGG CCTCGCGCTG
CGCACCTCGC AGGCCTGGCA CCGGGGCAAC GCGAGCTATC TCGACGGCGA CATCGACGAA
ACCCGGCTGG TCGTCGATTA CTCCCGCTCG ATCTGGTGA
|
|---|
| Protein sequence | MQNLRRAVFA GLVAGTLSEG AAATAGDGGF VEDSELQFLA RTYYFNRDYR DSPNNAGRNR
FKPRSERNGY REETTQGLRL QFASGYTPGS LGFGLDAHAM LGLQLDSGGG RTGTGNLPVG
ADGHPDHRYG KVGGALRLRH GETRLKYGQT TTSAPVFAAS SNRTLSGMAY GLLLEDRSFD
GLLLEGGRFT AASGPGESKV RGDISTVYGR LGAYPVRLDA VGFLGGQWQA TERLQLSLYA
SRFDDIWQQA YFGASHRQPL GGERALRVDL DAYRTRDSGQ SRFGRIDTLA SSLALGYEQG
PQRITLAYQR VHGEQPFDYM AFGDGRSSAS MVLANSVGYS DFNGPGERSW QLRYDLDLGA
LGLPGLSLHA LHARGRAGAS ASSAAESIYA GLYGRDGRHR ESDLGFAYRV KAGPLAGLAL
RTSQAWHRGN ASYLDGDIDE TRLVVDYSRS IW
|
|---|
| |