| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_02070 |
|---|
| Symbol | |
|---|
| ID | 4383566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 189058 |
|---|
| End bp | 190464 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639322723 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_788324 |
|---|
| Protein GI | 116053887 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.450253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGCG AAGACCAACG CCCCAACGAC CTCATCTACG GCCTCGACGA CCGGCCGCGC
CCGCTTCCCG CCTTCCTTGC CGCGCTACAG CACGTGCTGG CCAGCTTCGT CGGCATCGTC
ACTCCGCCGC TGGTGATCGG CTCGCTGCTC GGCCTCGGCG AGCACCTGCC GTACCTGATC
AGCATGGCGC TGATGGTTTC CGGCGCCGGC ACCCTGATCC AGGCGCGCCG GCCGTTCGGC
ATCGGCGCCG GGATGATCTG CCTGCAAGGC ACCAGCTTCG CCTTCCTCGG CGCCGTGCTG
GCCGCCGGGA TGCTGGTGAA GCAGCGCGGC GGCGGTCCCG AGGAGATCCT CGCGATGATC
TTCGGCGTGT GCTTCTTCGG CGCCTTCGTG CAGATCGTCC TCAGTCGGTT CCTCGGCCAT
CTTCGCCGGG TGATCACGCC GCTGGTCACC GGCATCGTCA TCACCCTGAT CGGCGTCAGC
CTGATCAAGG TCGGCATCAC CGACCTCGGC GGCGGAGCCG GGGCCACGGA CTTCGGCGCA
CCGGCCAATC TCGCGCTGGG CGCGCTGGTG CTGCTGAGCA TCGTCCTGCT GAACCGCTCG
CGCCTGCCCT GGCTGCGCCT GGCCGCCATC GTCATCGGCC TGGCGCTGGG TACCCTGGCG
GCCTGGGCGA CCGGCCTGTT CGTTCCGCGG GCGTTGCCCG AGCTGCCGCT GGTCAGCCTG
CCGCAGCCGT TCCGCTTCGG CTTCGCCTTC GACTGGATGG CCTTCCTGCC GGTGGCGCTG
ATCTACCTGA TCAGCAGCAT CGAGACGGTC GGCGACCTGA CCGCCAACTG CATGCTCTCG
CGGCAGCCCC TGGAGGGGCC GGCGTATCTG CAGCGGTTGC GCGGCGGAGT GCTCGGCGAC
GGCGTCAGTT GCCTGCTGGC AGCCACCTTC AGCGCCTTCC CGAACACCAC CTTCGCGCAG
AACAACGGGG TGATCCAGCT CACCGGGGTG GCCAGCCGGC ACGTCGGGAT CTATATCGGC
GGCGTGTTGC TGGCGCTCGG CCTGTTCCCC TGGATCGGCG CGATCCTCCA GCAGATCCCC
AAGCCGGTGC TCGGCGGCGC CACCCTGGTG ATGTTCGGCA GCGTCGCCGC CGCCGGCATC
CGCATTCTCG GCCAGACCGC GATGGACCGC CGCAGCGTGC TGATCATCGC CGCCTCGTTC
GGCGTCGGCC TCGGCGTGGC CGCGCAGCCG ACCCTGCTCG ACCAGATGCC GGCGGTGGTG
AAGACCCTGT TCGACTCGGC GATCACCAGC GGCGGCATCA CCGCCATCCT GCTCAACCTG
CTGCTGCCCG AGGAGCGCGT TGCCGAAGCG GCGCAGGCCA GCGCGAAGGG CGGCGCCCTG
GCGCGCTGGC GCAAGCCGCT GGGTTGA
|
|---|
| Protein sequence | MHSEDQRPND LIYGLDDRPR PLPAFLAALQ HVLASFVGIV TPPLVIGSLL GLGEHLPYLI
SMALMVSGAG TLIQARRPFG IGAGMICLQG TSFAFLGAVL AAGMLVKQRG GGPEEILAMI
FGVCFFGAFV QIVLSRFLGH LRRVITPLVT GIVITLIGVS LIKVGITDLG GGAGATDFGA
PANLALGALV LLSIVLLNRS RLPWLRLAAI VIGLALGTLA AWATGLFVPR ALPELPLVSL
PQPFRFGFAF DWMAFLPVAL IYLISSIETV GDLTANCMLS RQPLEGPAYL QRLRGGVLGD
GVSCLLAATF SAFPNTTFAQ NNGVIQLTGV ASRHVGIYIG GVLLALGLFP WIGAILQQIP
KPVLGGATLV MFGSVAAAGI RILGQTAMDR RSVLIIAASF GVGLGVAAQP TLLDQMPAVV
KTLFDSAITS GGITAILLNL LLPEERVAEA AQASAKGGAL ARWRKPLG
|
|---|
| |