| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01720 |
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| Symbol | ahpF |
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| ID | 4384256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 156872 |
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| End bp | 158437 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639322696 |
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| Product | alkyl hydroperoxide reductase subunit F |
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| Protein accession | YP_788297 |
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| Protein GI | 116053860 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.452845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGACG CCAATCTTAA AACCCAGTTG AAGGCCTACC TGGAAAAGGT CAGCCAGCCG
TTCGAGATCG TCGCGTCCCT CGATGACAGC GACAAATCCC GCGAGCTGCT GGGCCTGCTG
CAAGACATCG TCGGCCTGAC CGACAAGATC ACCCTGAAGA CCGACGGCAG CGATGCGCGC
AAACCGTCGT TCTCGCTGAA CCGCCCCGGT GCGGACATCG GCCTGCGCTT CGCCGGTATC
CCCATGGGCC ACGAATTCAC CTCGCTGGTG CTGGCCCTGC TGCAGGTAGG CGGCCACCCC
TCCAAGCTCG ACGCGGACGT GATCGAGCAG GTCAAGGGCA TCGAGGGCAC CTTCGAGTTC
GAAACCTACT TCTCGCTGTC CTGCCAGAAC TGCCCGGACG TGGTCCAGGC GCTGAACCTG
ATGGCCGTGC TCAACCCGAA CATCCGTCAC GTCGCCATCG ACGGCGCGCT GTTCCAGGAT
GAGGTCGAGG CGCGCCAGAT CATGTCGGTG CCGAGCATCT ACCTCAACGG CGAAGTCTTC
GGCCAGGGCC GCATGGGCGT GGAAGAGATC CTCGCCAAGA TCGACACCGG CGCCGCCGCC
CGCGACGCCG AGAAGCTGAC CGCCCGCGAC GCCTTCGACG TACTGGTGGT CGGCGGTGGT
CCGGCCGGCG CCGCGGCGGC GATCTACGCC GCGCGCAAGG GCATTCGCAC CGGCGTCGCC
GCCGAGCGCT TCGGCGGCCA GGTGCTGGAC ACCATGGCCA TCGAGAACTT CATCTCGGTG
CAGGAGACCG ACGGGCCGAA GCTGGCGCGG GCGCTGGAAG AGCACGTGCG TCACTACGAG
GTCGACATCA TGAACCTGCA GCGCGCCAGC AAGCTGGTTC CGGCGAAGAA CACCGGCGAG
TTGCACGAGG TGCAGTTCGA GAGCGGCGGC AGCCTCAAGG CCAAGACCCT GATCCTCGCC
ACCGGCGCTC GCTGGCGCGA AATGGGCGTG CCCGGCGAGC AGGAATACAA GGCCAAGGGC
GTGTGCTTCT GCCCGCACTG CGACGGCCCG CTGTTCAAGG GCAAGCGCGT GGCGGTGATC
GGCGGCGGCA ACTCTGGCGT CGAGGCGGCC ATCGACCTGG CCGGCATCGT CGCCCATGTG
ACCCTGCTGG AATTCGACAG CAAGTTGCGC GCCGATGCCG TGCTGCAACG CAAGCTCTAC
AGCCTGCCGA ACGTCGAGGT GATCACCAGT GCCCTGACCA GCGAAGTGAA GGGCGACGGC
CAGAAGGTCA CCGGCCTGGT GTACAAGGAC CGCAACTCCG AGGAGTTCAA GTCGATCGAG
CTGGAAGGCA TCTTCGTGCA GATCGGCCTG CTGCCCAACA CCGAGTGGCT CAAGGGCAGC
GTCGAGCTGT CGCCGCGTGG CGAGATCATC GTCGACGCCC GTGGCGAGAC CTCGCTGCCC
GGCATCTTCG CCGCCGGCGA CGTGACCACG GTGCCGTACA AGCAGATCGT GATCGCCGTG
GGCGAGGGCG CCAAGGCTTC GCTGAGCGCC TTCGACCACC TGATCCGGAC CTCCGCGCCG
GAGTGA
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| Protein sequence | MLDANLKTQL KAYLEKVSQP FEIVASLDDS DKSRELLGLL QDIVGLTDKI TLKTDGSDAR
KPSFSLNRPG ADIGLRFAGI PMGHEFTSLV LALLQVGGHP SKLDADVIEQ VKGIEGTFEF
ETYFSLSCQN CPDVVQALNL MAVLNPNIRH VAIDGALFQD EVEARQIMSV PSIYLNGEVF
GQGRMGVEEI LAKIDTGAAA RDAEKLTARD AFDVLVVGGG PAGAAAAIYA ARKGIRTGVA
AERFGGQVLD TMAIENFISV QETDGPKLAR ALEEHVRHYE VDIMNLQRAS KLVPAKNTGE
LHEVQFESGG SLKAKTLILA TGARWREMGV PGEQEYKAKG VCFCPHCDGP LFKGKRVAVI
GGGNSGVEAA IDLAGIVAHV TLLEFDSKLR ADAVLQRKLY SLPNVEVITS ALTSEVKGDG
QKVTGLVYKD RNSEEFKSIE LEGIFVQIGL LPNTEWLKGS VELSPRGEII VDARGETSLP
GIFAAGDVTT VPYKQIVIAV GEGAKASLSA FDHLIRTSAP E
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