| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01110 |
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| Symbol | |
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| ID | 4383509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 108629 |
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| End bp | 110560 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639322647 |
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| Product | hypothetical protein |
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| Protein accession | YP_788248 |
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| Protein GI | 116053811 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.124023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA CCCGCCTGGT CCAGGTGGAT TGCCCGCTGG GGCCGGACGT GCTGCTGTTG
CAGCGCATGG AGGGACGCGA GGAACTGGGA CGGCTGTTCG CCTACGAGCT GCACCTGGTA
TCGGAAAATC CCAACCTGCC GCTGGAGCAG TTGCTCGGCA AGCCGATGAG CCTGTCGCTG
GAGCTGCCCG GCGGCAGCCG GCGCTTCTTT CACGGTATCG TCGCGCGCTG TAGCCAGGTG
GCCGGGCACG GCCAGTTCGC CGGCTACCAG GCCACCCTGC GGCCCTGGCC GTGGCTGCTG
ACGCGCACCT CGGACTGCCG CATCTTCCAG AACCAGAGCG TGCCGGAGAT CATCAAGCAG
GTGTTCCGCG ACCTCGGCTT TTCCGATTTC GAGGATGCCC TCACGCGCCC CTACCGCGAG
TGGGAATACT GCGTGCAGTA CCGCGAGACC AGCTTCGACT TCATCAGCCG GCTGATGGAA
CAGGAGGGCA TCTACTACTG GTTCCGCCAT GAGCAGAAGC GCCACATCCT GGTGCTCTCC
GACGCCTACG GCGCGCATCG CAGCCCGGGT GGCTACGCCA GCGTGCCGTA CTACCCGCCG
ACCCTCGGCC ATCGCGAGCG CGACCACTTC TTCGACTGGC AGATGGCACG CGAGGTCCAG
CCCGGTTCGC TGACCCTCAA CGACTACGAC TTCCAGCGCC CCGGCGCGCG CCTGGAGGTG
CGTTCGAACA TCGCCCGGCC GCACGCGGCG GCCGACTACC CGCTGTACGA CTATCCCGGC
GAATACGTGC AGAGCCAGGA CGGCGAGCAG TACGCGCGCA ACCGCATCGA GGCGATCCAG
GCGCAGCACG AGCGCGTGCG CCTGCGCGGC GTGGTGCGTG GGATCGGTGC CGGGCACCTG
TTCCGCCTGA GCGGCTATCC GCGCGATGAC CAGAACCGCG AGTACCTGGT GGTCGGCGCC
GAATACCGGG TGGTCCAGGA ACTCTACGAA ACCGGCAGCG GCGGCGCCGG CTCGCAGTTC
GAGAGCGAGC TGGACTGCAT CGACGCCAGC CAGTCGTTCC GCCTCCTGCC GCAGACCCCG
GTGCCGGTGG TGCGCGGTCC GCAGACCGCG GTGGTGGTGG GGCCCAAGGG CGAGGAGATC
TGGACCGACC AGTACGGCCG GGTCAAGGTG CACTTCCACT GGGATCGCCA CGACCAGTCG
AACGAGAACA GCTCCTGCTG GATTCGCGTG TCCCAGGCCT GGGCCGGGAA GAACTGGGGT
TCGATGCAGA TCCCGCGGAT CGGCCAGGAA GTGATCGTCA GCTTCCTCGA AGGCGACCCG
GACCGGCCGA TCATCACCGG GCGGGTCTAC AACGCCGAGC AGACGGTGCC CTACGAGCTG
CCGGCGAACG CCACCCAGAG CGGGATGAAG AGCCGTTCGA GCAAGGGCGG CACGCCGGCC
AACTTCAACG AGATCCGCAT GGAGGACAAG AAGGGCGCCG AGCAGTTGTA CATCCACGCC
GAGCGCAACC AGGACAACCT GGTCGAGAAC GATGCCTCGC TGTCGGTCGG CCACGACCGC
AACAAGAGCA TCGGCCACGA CGAGCTGGTA CGCATCGGCA ACAACCGCAC CCGCGCGGTG
AAGCTCAACG ACACCCTGCT GGTGGGCGGG GCGAAGAGCG ACAGCGTCAC CGGCACCTAC
CTGATCGAGG CCGGTGCGCA GATCCGCCTG GTCTGCGGCA AGAGCGTGGT GGAGTTCAAC
GCCGACGGCA CCATCAATAT CTCCGGCAGC GCCTTCAACC TCTACGCCAG CGGCAACGGC
AACATCGACA CCGGCGGCCG CCTCGACCTC AATTCCGGCG GTGCCAGCGA GGTCGACGCC
AAGGGCAAGG GCGTGCAGGG CACCATCGAC GGCCAGGTAC AGGCGATGTT TCCGCCGCCG
GCGAAGGGCT GA
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| Protein sequence | MQLTRLVQVD CPLGPDVLLL QRMEGREELG RLFAYELHLV SENPNLPLEQ LLGKPMSLSL
ELPGGSRRFF HGIVARCSQV AGHGQFAGYQ ATLRPWPWLL TRTSDCRIFQ NQSVPEIIKQ
VFRDLGFSDF EDALTRPYRE WEYCVQYRET SFDFISRLME QEGIYYWFRH EQKRHILVLS
DAYGAHRSPG GYASVPYYPP TLGHRERDHF FDWQMAREVQ PGSLTLNDYD FQRPGARLEV
RSNIARPHAA ADYPLYDYPG EYVQSQDGEQ YARNRIEAIQ AQHERVRLRG VVRGIGAGHL
FRLSGYPRDD QNREYLVVGA EYRVVQELYE TGSGGAGSQF ESELDCIDAS QSFRLLPQTP
VPVVRGPQTA VVVGPKGEEI WTDQYGRVKV HFHWDRHDQS NENSSCWIRV SQAWAGKNWG
SMQIPRIGQE VIVSFLEGDP DRPIITGRVY NAEQTVPYEL PANATQSGMK SRSSKGGTPA
NFNEIRMEDK KGAEQLYIHA ERNQDNLVEN DASLSVGHDR NKSIGHDELV RIGNNRTRAV
KLNDTLLVGG AKSDSVTGTY LIEAGAQIRL VCGKSVVEFN ADGTINISGS AFNLYASGNG
NIDTGGRLDL NSGGASEVDA KGKGVQGTID GQVQAMFPPP AKG
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