Gene PA14_01010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_01010 
Symbol 
ID4383501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp98900 
End bp99418 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content64% 
IMG OID639322639 
Producthypothetical protein 
Protein accessionYP_788240 
Protein GI116053803 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCA CTACCAGCAG TCAGAAGTTC ATCGCCAGGA ACCGGGCGCC ACGCGTGCAG 
ATCGAGTACG ACGTGGAGCT GTACGGTGCC GAGAAGAAGG TCCAGTTGCC CTTCGTCATG
GGCGTCATGG CCGACCTCGC CGGCAAGCCC GCCGAACCCC AGGCGGCGGT CGCCGACCGC
AAGTTCCTGG AGATCGACGT GGACAACTTC GATGCCCGGC TGAAGGCGAT GAAGCCGCGG
GTGGCCTTCA ACGTACCGAA CGTGCTGACC GGCGAAGGCA ACCTGAGCCT GGACATCACC
TTCGAGAGCA TGGACGACTT CAGCCCCGCC GCGGTGGCGC GCAAGGTCGA TTCGCTGAAC
AAGCTGCTTG AGGCGCGTAC CCAGCTGGCC AACCTGCTGA CCTACATGGA TGGCAAGACC
GGCGCCGAGG AAATGATCAT GAAGGCGATC AAGGACCCGG CCCTGCTTCA GGCCCTGGCC
AGCGCGCCGA AGCCCAAAGA CGACGAGCCG CAGGCGTAA
 
Protein sequence
MGSTTSSQKF IARNRAPRVQ IEYDVELYGA EKKVQLPFVM GVMADLAGKP AEPQAAVADR 
KFLEIDVDNF DARLKAMKPR VAFNVPNVLT GEGNLSLDIT FESMDDFSPA AVARKVDSLN
KLLEARTQLA NLLTYMDGKT GAEEMIMKAI KDPALLQALA SAPKPKDDEP QA