| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_00830 |
|---|
| Symbol | |
|---|
| ID | 4380418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 81025 |
|---|
| End bp | 82737 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639322626 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_788227 |
|---|
| Protein GI | 116053792 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.313618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAGA AAGCCATTCT TCCGCTCGCC CTCGGCGCCT GCCTGGCATT TGCCGCGCCG
GCCTGGGCCG AAGGCGACTC GCCGGACAAT CCCAAGCCGC TGGCCGACGA CGTCGCCCTG
CCGCTGCCGT GTGGCGGCGA GATGGTCTTC CGGCATGTCT ACGTACTCGC CGAAGGCGCC
CTCGACGATC GCGAGGTCAA CCTCGGCTAC GCCTTCAACG AAGGCGAGGC GGGCTACCAG
CAGTCGTTCA TCTCCGGCTA CCGGCGCGAC TACGTGAACG GCCAGTTCAG CCTCGCCGAC
CTGGCACCGG CCTGGCAGCA GAAGCTCTCC GCCAGCCTGC CGAAGCCCGC CGCCGGCACC
CCGCTGAAGC CGATGCTGTA CTTCATCGGC AAGTACGAGG TGACCGCCCG CCAGTACGCC
GCAGTGATGA GCCAGGCGGC CGCGCTCTCC GGCCAGGGCG AAGCGCCGGC CTGCGACGTG
CCGGGCGGGA TGGCCGCGCG GCTGCCCAAG GTCGACCTCT CGCGCTTCGA CGCCGAACGC
TTCGGCGCGG TGTACAGCGC CTGGCTGCTG AAGAACCACC CGGATCTGCT GCCGGTCAGC
GGCCGCGGCA AGAATCCCGA GGACGGCGGC ATCGGCTTCG TCCGCCTGCC CACCGAGGTC
GAGTGGGAGT TCGCCGCGCG CGGCGGCCAG GCGGTCAGCC GCCAGGAACT GGAAGGCCGG
CTGTTCCCGC GCAAGGTCGA GGGCAGCGAC CAGGAAGGCC CGCTGGGCGA CTGGGCGGTG
TACAACCAGG TCGCCGGCGG TACCGGCCAG GCCGCGCGAC TGTTGCCGGT AGGGATGAAG
CGGCCGAACC CGCTGGGCCT GTTCGACGTG ATCGGCAATG CCGCGGAGAT GGTCCAGGAG
TCCTTCCAAC TGGTCCACGC CGGTCGCCGG CAGGGCACAT ATGGCGGTTT CGTGGTGAAG
GGCGGGAACT ATCTCGAAGG CGAGATGACT CTATTCACCG GGATGCGCCG CGAATACCCG
CTGTTCGCCG CCGACGGCAG CGAACAGCGC AACGAGACCA CCGGTTTCCG CGTCGCCATC
GGCGCGCTGT CCGCGCCGCG CTCGCGCTAT CCCGAGCTGT TCGCCCAATG GCAGAAGGAA
GGCCGACTAG CGGCATTGAC CGATGCCATC GATGACGCTC AAGATCCCAC CAAGCAATTG
GACGGAATCA TTGCCGCCAC CCGCGACCCG CAGATGCAGG CGCAGTTGGC CCAGATAAAC
GAGGAACTCA AGCGTAACGT TTCGTTGATC GCTCGGCAGC GCGAAGAGGC CGCCGGAAAC
CTGATACAGT CGGCGGCACT GGTCGCCGAG ACGATCAACA ACTACAACAT ACGCCTGACC
AACCTCAAGA AGGACAGGGA GAAAGCCGTG GCAGCCAGGG ATCAGGCGAC CGCCCAGCTC
TATGCCGGCG CCATCGCCAA CGGGCGCAGC GCCCTCGATG GCGCATTGGC CATCTACATC
GACAACCTCG CCACCGGCAC CCGTTACACC GACGCGGTGA TCCAGGCGCA GTTCCAGCGC
ATCCAGGAAG AACTCAATCG CAACCCGGTT CTGGGCAAGA GCCTGGTCAA GCGCGCGACC
CTGTTCGTCA AACACGTCGG AGATTATCGC CAGCAGCACC GGGCCGAGCC GGAGGCGGTA
TTGAAGGAAT TGCTCGCGTC CAGCGGGCGT TGA
|
|---|
| Protein sequence | MFEKAILPLA LGACLAFAAP AWAEGDSPDN PKPLADDVAL PLPCGGEMVF RHVYVLAEGA
LDDREVNLGY AFNEGEAGYQ QSFISGYRRD YVNGQFSLAD LAPAWQQKLS ASLPKPAAGT
PLKPMLYFIG KYEVTARQYA AVMSQAAALS GQGEAPACDV PGGMAARLPK VDLSRFDAER
FGAVYSAWLL KNHPDLLPVS GRGKNPEDGG IGFVRLPTEV EWEFAARGGQ AVSRQELEGR
LFPRKVEGSD QEGPLGDWAV YNQVAGGTGQ AARLLPVGMK RPNPLGLFDV IGNAAEMVQE
SFQLVHAGRR QGTYGGFVVK GGNYLEGEMT LFTGMRREYP LFAADGSEQR NETTGFRVAI
GALSAPRSRY PELFAQWQKE GRLAALTDAI DDAQDPTKQL DGIIAATRDP QMQAQLAQIN
EELKRNVSLI ARQREEAAGN LIQSAALVAE TINNYNIRLT NLKKDREKAV AARDQATAQL
YAGAIANGRS ALDGALAIYI DNLATGTRYT DAVIQAQFQR IQEELNRNPV LGKSLVKRAT
LFVKHVGDYR QQHRAEPEAV LKELLASSGR
|
|---|
| |