| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_00680 |
|---|
| Symbol | |
|---|
| ID | 4381749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 68346 |
|---|
| End bp | 69266 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639322611 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_788212 |
|---|
| Protein GI | 116053777 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCC TGACCGCCAC CCGCGTCTTC GTCGAGGTCA TCGACAGCGG CAGCCAGACC
GCCGCCGCCG AGCGTCTGGA CATGTCCCGG GCGATGGTCT CGCGCTACCT CGCCGAGTTG
GAGGAGTGGG TCGGCGCACG CCTGCTGCAC CGCAGCACCC GCCGCCTGAG CCTGACCGAC
GCCGGCGCGG AGCTGTTGCC GCAGTGCCGC GAGATGCTCG CCGTGGCCGA CGCCATGCAG
GCCACCGGCC AGACCCGCCG CGACAGCCCG CGCGGCACCC TGCGCATCAC CAGCAGCCTG
TCCTTCGCCC AGGCCTGGCT GACCCGTGCC GCCGCCGCCT TCGTCGAGCG CTACCCGGGC
ACCGCCATCG ACCTGCAGGT CAACAGCCAG GTGGTCAACC TGGTGGAGGA GCGCATCGAC
CTGGCCCTGC GCATCGCCAA CCAGCTCGAC CCCAACCTGA TCGCCCGCCG CCTCGGCGAA
TGCCGCTCGG TGATCTGCGC CGCGCCGGAC TACCTGCGCG GCCACGGCAC CCCGCGGCGC
CCGGAGGACC TGGCGCTGCA CAACTGCCTG ACCTACTCCT ACTTCGGCCG CAGTCTCTGG
CAGTTCGAGC GCGACGGCGA GCCGACCAGC GTGCCGGTGG GTGGCAGTCT CAGCGCCAAC
GAATCCACCG TGCTGCTGGA GGCCGCCGCC GCCGGTGCCG GGATCAGCCA GCAGCCGCTG
TACTCGGCAG CCCCGCTGAT CCGTAGCGGA CGCCTGGTGG CGCTGCTGCC GGAGTGGTCG
CCGCAGGTGC TCGGCATCCA CGCGGTGTAC GCCTCGCGCC GGCAGATGCC GCCGGCGCTG
CGGGCGCTGC TGGACTTCCT GGTCGAACGG ATGGCGGCCG ATCCGCACTG GGACGAGGCG
GGCCCCCTGG CGCTGGCGTG A
|
|---|
| Protein sequence | MDRLTATRVF VEVIDSGSQT AAAERLDMSR AMVSRYLAEL EEWVGARLLH RSTRRLSLTD
AGAELLPQCR EMLAVADAMQ ATGQTRRDSP RGTLRITSSL SFAQAWLTRA AAAFVERYPG
TAIDLQVNSQ VVNLVEERID LALRIANQLD PNLIARRLGE CRSVICAAPD YLRGHGTPRR
PEDLALHNCL TYSYFGRSLW QFERDGEPTS VPVGGSLSAN ESTVLLEAAA AGAGISQQPL
YSAAPLIRSG RLVALLPEWS PQVLGIHAVY ASRRQMPPAL RALLDFLVER MAADPHWDEA
GPLALA
|
|---|
| |