Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_00090 |
Symbol | glyS |
ID | 4385189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 10434 |
End bp | 12488 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639322562 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_788163 |
Protein GI | 116053728 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA AGGATTTCCT GGTCGAACTG GGCACCGAAG AGCTGCCGCC AAAAGCCCTC AACAGCCTCG GCGAAGCCTT CCTCAGCGGT ATCGAGAAGG GCCTCAAGGC TGCCGGTCTG AGTTACGCCG CTGCGCGTTT CTATGCGGCG CCGCGCCGTC TCGCCGTGCT GGTCGAGCAA CTCGCCGTGC AGCAGCCCGA CCGTACCGTC AACCTAGACG GTCCGCCGCT ACAGGCCGCC TTCGACGCCA GCGGTAACCC GACCCAGGCC GCCCTGGGCT TCGCCAAGAA GTGCGGCGTG GATCTACAGC AGATCGACAA GAGCGGTCCG AAGCTGCGCT TCAGCCAGAC CATCGCCGGC CAACCGGCCG CCGGCCTGCT GCCGGGCATC GTCGAGGCCT CGTTGAACGA ACTGCCGATT CCCAAGCGGA TGCGCTGGGC AGCTCGCCGC GAGGAGTTCG TGCGTCCGAC CCAATGGCTG GTGATGCTGT TCGGCGACGA CGTGGTCGAG TGCGAGATCC TCGCCCAGAA AGCCGGGCGC GAATCCCGTG GCCACCGCTT CCACAATCCG GACAATGTGC GTATTTCCAG CCCGGCAGCG TACCTGGAAG ACCTGCGCGG CGCTCATGTG CTGGCCGATT TCGCCGAGCG CCGCGAGCTG ATCGCCAAGC GCGTGGCAGA ACTGGCCGCC GAGCAACAGG GCAGCGCCAT CGTGCCGCCG AGCCTGCTCG ACGAAGTGAC TGCACTGGTC GAGTGGCCGG TGCCGCTGGT CTGCTCCTTC GAGGAGCGCT TCCTCGAGGT CCCGCAGGAA GCCCTGATCA CCACCATGCA GGACAACCAG AAATACTTCT GCCTGCTGGA CGCCAACGGC AAGCTGCTGC CGCGCTTCAT CACCGTCGCC AACGTCGAGA GCAAGGCGCC GGAGAACATC GTCAGCGGTA ACGAGAAGGT GGTTCGTCCG CGCCTCACCG ACGCCGAGTT CTTCTTCAAG CAGGACAAGA AGCAGCCGCT CGAAAGCTTC AACGAGCGCC TGCGCAACGT AGTGTTCCAG GCCCAGCTCG GCACCGTGTT CGAGAAGGCC CAGCGCGTCT CCGGCCTGGC CGCCTACATC GCCGAACGTA TAGGCGGCAA TGCGCAGAAC GCCGCGCGCG CCGGCATCCT GTCCAAGTGC GACCTGGCGA CCGAGATGGT CGGCGAGTTC CCCGAGATGC AGGGCATCGC CGGCTACTAC TACGCCACCC ACGGCGGCGA AGCGGAAGAC GTCGCCCTGG CCCTCAACGA GCAGTACATG CCGCGCGGCG CCGGCGCCGA GCTACCCTCG ACCCTGACCG GCGCCGCCGT GGCGGTGGCC GACAAGCTCG ATACCCTGGT CGGTATCTTC GGCATCGGCA TGCTTCCCAC CGGCAGCAAG GACCCCTACG CGCTGCGCCG CGCTGCGCTG GGCGTGCTGC GCATCCTCAT CGAGAAGCAG CTCGACCTGG ACCTGGTAGC CGCGGTCAAC GCCGCCGTCG AGCAATATGG CGACAAGGTC AAGGCCGCCG GCCTGGCCGA GCAGGTGCTG GACTTCGTGT TCGACCGCCT GCGCGCGCGC TACGAGGACG AAGGCGTGGA CGTGGCCGTG TACCAGTCGG TGCGCGCGCT CAAGCCAAGC TCGCCGCTGG ACTTCGACCA GCGCGTACAG GCCGTCCAGG CCTTCCGCCA GTTGCCTGAA GCCGAGGCCC TGGCCGCGGC GAACAAACGG GTGTCGAATA TTCTCGCCAA GTCCGAGGAC GAGGTTCCGC CGAACGTGGA TGCCAGCCTG CTGGTGGAAG CTGCCGAGAA GGCCCTGGGC AGCGCCGTGG CGAACGCCGA GAGCGAAGTC GCGCCGCTGG CAGCGGCACG CGACTATCGC GCCGCGCTGG CCCGCCTGGC GGCCTTGCGC GAGCCGGTGG ATACGTTCTT CGCCGATGTG ATGGTCAATG TCGACGACGC GGCGGTGCGC GCCAACCGCT ATGCGCTGCT GGCCAAGCTG CGCGGGTCGT TCCTCGGGGT GGCGGACATC TCGCTGCTCG GCTGA
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Protein sequence | MSAKDFLVEL GTEELPPKAL NSLGEAFLSG IEKGLKAAGL SYAAARFYAA PRRLAVLVEQ LAVQQPDRTV NLDGPPLQAA FDASGNPTQA ALGFAKKCGV DLQQIDKSGP KLRFSQTIAG QPAAGLLPGI VEASLNELPI PKRMRWAARR EEFVRPTQWL VMLFGDDVVE CEILAQKAGR ESRGHRFHNP DNVRISSPAA YLEDLRGAHV LADFAERREL IAKRVAELAA EQQGSAIVPP SLLDEVTALV EWPVPLVCSF EERFLEVPQE ALITTMQDNQ KYFCLLDANG KLLPRFITVA NVESKAPENI VSGNEKVVRP RLTDAEFFFK QDKKQPLESF NERLRNVVFQ AQLGTVFEKA QRVSGLAAYI AERIGGNAQN AARAGILSKC DLATEMVGEF PEMQGIAGYY YATHGGEAED VALALNEQYM PRGAGAELPS TLTGAAVAVA DKLDTLVGIF GIGMLPTGSK DPYALRRAAL GVLRILIEKQ LDLDLVAAVN AAVEQYGDKV KAAGLAEQVL DFVFDRLRAR YEDEGVDVAV YQSVRALKPS SPLDFDQRVQ AVQAFRQLPE AEALAAANKR VSNILAKSED EVPPNVDASL LVEAAEKALG SAVANAESEV APLAAARDYR AALARLAALR EPVDTFFADV MVNVDDAAVR ANRYALLAKL RGSFLGVADI SLLG
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