Gene PA14_00020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_00020 
SymboldnaN 
ID4384100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2056 
End bp3159 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID639322556 
ProductDNA polymerase III subunit beta 
Protein accessionYP_788157 
Protein GI116053722 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA CCATTCAACG CGAAGCCCTG TTGAAACCGC TGCAACTGGT CGCCGGCGTC 
GTGGAACGCC GCCAGACATT GCCGGTTCTC TCCAACGTCC TGCTGGTGGT CGAAGGCCAG
CAACTGTCGC TGACCGGCAC CGACCTCGAG GTCGAGCTGG TTGGTCGCGT GGTACTGGAA
GATGCCGCCG AACCCGGCGA GATCACCGTA CCGGCGCGCA AGCTGATGGA CATCTGCAAG
AGCCTGCCGA ACGACGTGCT GATCGACATC CGTGTCGAAG AGCAGAAACT TCTGGTGAAG
GCCGGGCGTA GCCGCTTCAC CCTGTCCACC CTGCCGGCCA ACGATTTCCC CACCGTAGAG
GAAGGTCCCG GCTCGCTGAA CTTCAGCATT GCCCAGAGCA AGCTGCGTCG CCTGATCGAC
CGCACCAGCT TCGCCATGGC CCAGCAGGAC GTGCGTTACT ACCTCAACGG CATGCTGCTG
GAAGTGAACG GCGGCACCCT GCGCTCCGTC GCCACCGACG GCCACCGACT GGCCATGTGC
TCGCTGGATG CGCAGATCCC GTCGCAGGAC CGCCACCAGG TGATCGTGCC GCGCAAAGGC
ATCCTCGAAC TGGCTCGTCT GCTCACCGAG CAGGACGGCG AAGTCGGCAT CGTCCTGGGC
CAGCACCATA TCCGTGCCAC CACTGGCGAA TTCACCTTCA CTTCGAAGCT GGTGGACGGC
AAGTTCCCGG ACTACGAACG CGTACTGCCG CGCGGTGGCG ACAAGCTGGT GGTCGGCGAC
CGCCAGCAAC TGCGCGAAGC CTTCAGCCGT ACCGCGATCC TCTCCAACGA AAAGTACCGC
GGCATTCGCC TGCAGCTTTC CAACGGTTTG CTGAAAATCC AGGCGAACAA CCCGGAGCAG
GAGGAGGCCG AGGAAGAAGT GCAGGTCGAG TACAACGGCG GCAACCTGGA GATCGGCTTC
AACGTCAGTT ACCTGCTCGA CGTGCTGGGT GTGATCGGTA CCGAGCAGGT CCGCTTCATC
CTTTCCGATT CCAACAGCAG CGCCCTGGTC CACGAGGCCG ACAATGACGA TTCTGCCTAT
GTCGTCATGC CGATGCGCCT CTAA
 
Protein sequence
MHFTIQREAL LKPLQLVAGV VERRQTLPVL SNVLLVVEGQ QLSLTGTDLE VELVGRVVLE 
DAAEPGEITV PARKLMDICK SLPNDVLIDI RVEEQKLLVK AGRSRFTLST LPANDFPTVE
EGPGSLNFSI AQSKLRRLID RTSFAMAQQD VRYYLNGMLL EVNGGTLRSV ATDGHRLAMC
SLDAQIPSQD RHQVIVPRKG ILELARLLTE QDGEVGIVLG QHHIRATTGE FTFTSKLVDG
KFPDYERVLP RGGDKLVVGD RQQLREAFSR TAILSNEKYR GIRLQLSNGL LKIQANNPEQ
EEAEEEVQVE YNGGNLEIGF NVSYLLDVLG VIGTEQVRFI LSDSNSSALV HEADNDDSAY
VVMPMRL