Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6506 |
Symbol | |
ID | 4315410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 1191024 |
End bp | 1192661 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638154350 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_778384 |
Protein GI | 115361247 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00389964 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.364964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA CGGCAGACAA TCCCTATACG ATCGGACTCG AGCGCGACCG GCCGAACTTC ATTGCCTTGT CGCCGCTGAC GTTTCTCGAA CGCGCCGCGT CTGTCTGGCC GGAGCGCACG GCCATCGTGC ACGGCACGAT TCGCCGCGAC TGGGCCGAAA CCTATCGGCG TTGCCGGCTG CTCGCCGGTG CGCTGCGCGG GCGCGGCATT GGCAACGGCG ATACGGTGGC GATGATCGCG GCCAATACAC CGGAACTGTT CGAGGCGCAT TTCGGTGTAC CGCTTTGCGG CGCCGTACTG AACACCATCA ACACACGGCT CGATGCCGAC ACGATCGCTT TCATTCTCGA CCACGGCGAC GCGAAGCTGC TGATCACCGA CCGCGAATTC TCCCCGACAG TGAAGAAAGC CCTGGCACGG CTTGGCCGCG TCATTCAGGT CATCGACATC GACGATCCAC AGTGTGGAGA AGGCGATCTG CTCGGCGAAA AAGACTACGA AGCGTTGCTG CAGGAGGCCA CGCACACGGA ATTCTCTGTC GCGATGCCGG AAGACGAATG GCAGGCCATT TCGCTTAACT ACACATCCGG CACGACGGGC AATCCGAAAG GCGTGGTGTA TCACCATCGC GGCGCATATC TGAACGCCGT GTCGAATGCA CTATCGTGGC ATCTGGACGA GGACACGACC TATTTGTGGA CCTTGCCGAT GTTTCATTGC AATGGTTGGT GCTTTCCCTG GACCATGGCG TTGGTGGCCG GCACCAGTGT CTTTCTGCGC CATACGCGGG CCGAGCGGAT TCTCGCCGCC ATCCGCACCG AGGCGGTCAC GCATTTTTGT GCCGCGTCCG TGGTGTTGAA CATGATCAAT AACGCCGCGC CGGAGCTGAA AGCGGGCATT CGTCACCGAG TCAAGGTCAT GACCGGCGGT GCGCCGCCGC CCGCTTCGGT GATCGCCGGC ATGGAGTGCA TGGGCTGGGA GGTGACGCAC GCGTACGGGT TGACCGAGTC TTATGGGCCG GTCGTGCAAT GCGTGTGGCG CGAGTCGTGG AATGCGCTCG AGCTCGATGC GAAAGCGCGA CTCAAGGCCC GCCAGGGTGT GCGCGGCCCT GTTCTCGAGG CAATGATGGT GGCCCGCCCG GATACGCTGG AGCCCGTTCC AAAAGACGGG CAAACGCTCG GCGAGGTATT TCTGCGCGGC AACAACGTCA TGAAGGGCTA CCTGAAGAAT CCGGACGCCA CCGTGGAGGC ATTTTCCGGC GGGTGGTTTC ACACGGGCGA TCTCGGGGTA TGGCATCCCG ATGGCTACCT GGAAATCAAG GATCGCTCGA AGGACATCAT CATCTCGGGA GGCGAAAACA TTTCGTCGAT CGAGATCGAG GACATACTGT ATTCCCATCC CGCTGTTCTG GAGGCGGCAA TCGTCGCGCG TCCCGACGAC AAGTGGGGCG AGACACCTTG TGCTTTCATC ACGCTCAAAG ACGATTCGGT CGTGACTGAA GCGGACATCA TCGCGTTTTG CCGCGAGCGG CTGGCACATT TCAAGGTGCC CAAGACCATC GTGTTCTCGC CACTGCCGAA GACTGCGACC GGCAAGATCC AGAAGTTCAA CTTGAGGGAA CGAGCGCGCC AGCTGTGA
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Protein sequence | MKTTADNPYT IGLERDRPNF IALSPLTFLE RAASVWPERT AIVHGTIRRD WAETYRRCRL LAGALRGRGI GNGDTVAMIA ANTPELFEAH FGVPLCGAVL NTINTRLDAD TIAFILDHGD AKLLITDREF SPTVKKALAR LGRVIQVIDI DDPQCGEGDL LGEKDYEALL QEATHTEFSV AMPEDEWQAI SLNYTSGTTG NPKGVVYHHR GAYLNAVSNA LSWHLDEDTT YLWTLPMFHC NGWCFPWTMA LVAGTSVFLR HTRAERILAA IRTEAVTHFC AASVVLNMIN NAAPELKAGI RHRVKVMTGG APPPASVIAG MECMGWEVTH AYGLTESYGP VVQCVWRESW NALELDAKAR LKARQGVRGP VLEAMMVARP DTLEPVPKDG QTLGEVFLRG NNVMKGYLKN PDATVEAFSG GWFHTGDLGV WHPDGYLEIK DRSKDIIISG GENISSIEIE DILYSHPAVL EAAIVARPDD KWGETPCAFI TLKDDSVVTE ADIIAFCRER LAHFKVPKTI VFSPLPKTAT GKIQKFNLRE RARQL
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