Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6505 |
Symbol | |
ID | 4315409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 1189675 |
End bp | 1190823 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638154349 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_778383 |
Protein GI | 115361246 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.202065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.549592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACG CAATGCCCGC CGGCCGGCCG GCGGATTCGC GCGCCGACAT CGCAACGGCG TCGGAGATTA TCGAAGAAGC GCGCGCCGGG CGGATGTTCA TTCTGGTCGA CGACGAGGAT CGCGAGAACG AAGGCGACCT TATCATTCCC GCGCAATTCG CCACGCCCGA CGCCGTCAAC TTCATGGCGA CGCATGCGCG TGGCTTGATC TGCCTCGCGA TGACACGCTC GCGCTGCGAA TCGCTGGGCT TGCATTTGAT GAGCCGAATC AACGGCTCGC GGCACGAGAC GGCCTTCACG GTGTCGATCG AGGCGCGTGA CGGTGTGAGT ACCGGCATCT CGGCGGCCGA CCGTTCCCGC ACGATTTCGA TTGCGATCAA TCCGGAAACG GGGCGAGACG AGCTCGTTTC TCCCGGGCAC GTCTTTCCGC TCATGGCGCG CGACGGCGGC ACGCTCGTGC GCGCGGGTCA CACCGAGGCG GCAGTAGATA TCGCCCGGCT GGCCGGGCTC GCACCGGCCG GTGCGATCTG CGAAATCATG AACGACGACG GCACCATGGC GAGGCTGCCG GACCTCATCG CCTTTTCACG GCGGCATCAG CTGAAGCTGG GCACGATCGC CGATCTCATC GCGTATCGCC GACGAACGGA ACGGCTCGTG GAGGCCGTTG AACACGGCAG CTTTACCGAG CCGAATGGAA GGCATTGGCG GATCGTGGTC TACCGGAACC GGATCGATCA GGTCGAGCAT ATCGCCTTCG TCATGGGCGA TCTACGGGGA GCGGACCCTG TTCTCGTGCG CATGCATGCG ATGGATACCA TGAACGACGT CATCGGCGGT CACCACCTCG CGTCCCTACG CGGCGCCGCG CGTTTGCTGG CGGACGAGAA TCGCGGCGTC ATCGTGGTGA TCCGCGAGTC CCGCGTCACG GCCGTGTCGG AACGTGTGCG TTCCATGATG CATCCCAAGC CTGCCGAGCC GGAACTGCGT GATTACGGAA TAGGCGCGCA AATTCTCACC GAACTCGGCG TGAAGAACAT GATCCTGCTC TCCAATCATG AAAGAACGAT CGTGGGCCTG GAGGGCTACG GTTTGAATAT GGTGGAGCAG AGAAAAATAG AGCGGATTCA CGACCATCAG GAAGTCTGA
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Protein sequence | MSNAMPAGRP ADSRADIATA SEIIEEARAG RMFILVDDED RENEGDLIIP AQFATPDAVN FMATHARGLI CLAMTRSRCE SLGLHLMSRI NGSRHETAFT VSIEARDGVS TGISAADRSR TISIAINPET GRDELVSPGH VFPLMARDGG TLVRAGHTEA AVDIARLAGL APAGAICEIM NDDGTMARLP DLIAFSRRHQ LKLGTIADLI AYRRRTERLV EAVEHGSFTE PNGRHWRIVV YRNRIDQVEH IAFVMGDLRG ADPVLVRMHA MDTMNDVIGG HHLASLRGAA RLLADENRGV IVVIRESRVT AVSERVRSMM HPKPAEPELR DYGIGAQILT ELGVKNMILL SNHERTIVGL EGYGLNMVEQ RKIERIHDHQ EV
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