Gene Bamb_6505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6505 
Symbol 
ID4315409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1189675 
End bp1190823 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content62% 
IMG OID638154349 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_778383 
Protein GI115361246 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.202065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.549592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG CAATGCCCGC CGGCCGGCCG GCGGATTCGC GCGCCGACAT CGCAACGGCG 
TCGGAGATTA TCGAAGAAGC GCGCGCCGGG CGGATGTTCA TTCTGGTCGA CGACGAGGAT
CGCGAGAACG AAGGCGACCT TATCATTCCC GCGCAATTCG CCACGCCCGA CGCCGTCAAC
TTCATGGCGA CGCATGCGCG TGGCTTGATC TGCCTCGCGA TGACACGCTC GCGCTGCGAA
TCGCTGGGCT TGCATTTGAT GAGCCGAATC AACGGCTCGC GGCACGAGAC GGCCTTCACG
GTGTCGATCG AGGCGCGTGA CGGTGTGAGT ACCGGCATCT CGGCGGCCGA CCGTTCCCGC
ACGATTTCGA TTGCGATCAA TCCGGAAACG GGGCGAGACG AGCTCGTTTC TCCCGGGCAC
GTCTTTCCGC TCATGGCGCG CGACGGCGGC ACGCTCGTGC GCGCGGGTCA CACCGAGGCG
GCAGTAGATA TCGCCCGGCT GGCCGGGCTC GCACCGGCCG GTGCGATCTG CGAAATCATG
AACGACGACG GCACCATGGC GAGGCTGCCG GACCTCATCG CCTTTTCACG GCGGCATCAG
CTGAAGCTGG GCACGATCGC CGATCTCATC GCGTATCGCC GACGAACGGA ACGGCTCGTG
GAGGCCGTTG AACACGGCAG CTTTACCGAG CCGAATGGAA GGCATTGGCG GATCGTGGTC
TACCGGAACC GGATCGATCA GGTCGAGCAT ATCGCCTTCG TCATGGGCGA TCTACGGGGA
GCGGACCCTG TTCTCGTGCG CATGCATGCG ATGGATACCA TGAACGACGT CATCGGCGGT
CACCACCTCG CGTCCCTACG CGGCGCCGCG CGTTTGCTGG CGGACGAGAA TCGCGGCGTC
ATCGTGGTGA TCCGCGAGTC CCGCGTCACG GCCGTGTCGG AACGTGTGCG TTCCATGATG
CATCCCAAGC CTGCCGAGCC GGAACTGCGT GATTACGGAA TAGGCGCGCA AATTCTCACC
GAACTCGGCG TGAAGAACAT GATCCTGCTC TCCAATCATG AAAGAACGAT CGTGGGCCTG
GAGGGCTACG GTTTGAATAT GGTGGAGCAG AGAAAAATAG AGCGGATTCA CGACCATCAG
GAAGTCTGA
 
Protein sequence
MSNAMPAGRP ADSRADIATA SEIIEEARAG RMFILVDDED RENEGDLIIP AQFATPDAVN 
FMATHARGLI CLAMTRSRCE SLGLHLMSRI NGSRHETAFT VSIEARDGVS TGISAADRSR
TISIAINPET GRDELVSPGH VFPLMARDGG TLVRAGHTEA AVDIARLAGL APAGAICEIM
NDDGTMARLP DLIAFSRRHQ LKLGTIADLI AYRRRTERLV EAVEHGSFTE PNGRHWRIVV
YRNRIDQVEH IAFVMGDLRG ADPVLVRMHA MDTMNDVIGG HHLASLRGAA RLLADENRGV
IVVIRESRVT AVSERVRSMM HPKPAEPELR DYGIGAQILT ELGVKNMILL SNHERTIVGL
EGYGLNMVEQ RKIERIHDHQ EV