| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6498 |
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| Symbol | |
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| ID | 4315402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1178064 |
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| End bp | 1179236 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638154342 |
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| Product | porin |
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| Protein accession | YP_778376 |
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| Protein GI | 115361239 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0845493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA AAAAAATCGA AATCATTGTC GGCTCGCTCG TGGGGTTGGC CAGTTCCGTC
GCGCATAGCC AAAGCAGCGT CACGCTCTAT GGCGAGATCG ACAACGGTAT TCATTACCAG
ACCAACGTAG GCGGCGGCAA AGCCGTCTAC ATGGACTCGC TGAACGGTAT CGACGGCAGT
CGCTGGGGGC TGACCGGCAA GGAAGATCTG GGAGGCGGTC TCAAGGCGAT TTTTACGCTC
GAGTCCGGCA TCAACGTGAA TAACGGACAA CTTGCCCAGG GCGGCACGGC GTTCGGCCGG
CAAGCTTTCG TCGGACTGAG CAGCGACGCT TACGGTTCTC TCACCGTCGG CCGTCAATAC
GACATGGTGT GGTATTTCCC CGAGTTTCTT GCCGGTGCCG CGGCGGTTGG CGACCTGGCG
AGCGCGCATC CGGGAGATTT CGACAACACC AGTAACAGCG TGCGATTCAA CAACTCGGTG
CGCTACATGA GCCCGGACTT CCACGGCTTC TCCTTTGGCG TCGAATATAG CCTCGGCGGC
GTGCCCGGCG ACTTCACTTC GACGTCGGGC TATTCGCTTG GAGTCGGCTA CACACATGGT
CCGCTTCAGA TCGGCGCGGC GTTCGATTAC TTCAAACACC CGACATCGAC ACCAGGTAAC
GGATGGTTCA CCAACTATGC AAGCGGCTTC AATCTGCTGG CCTCTTCCCT GAACTCGGCT
TATCAGGTCG CGCAAGCCTA TCAGGACGCC GTCATCGCGG CGGCCTACAC GATCGGAAAC
GCGACGATCA GCGCGTCGTA TTCGAATGTT CAATACGCCA ATCTCGGTGC GTCGTTCCAG
AACGGTACGG CCATCTTCAA CAACTATGAC ATCGGTTTGA ACTACCGTGT CACGCCGGCC
TTTTTCGTCG GCGTCGCGTA TGACTACATG AAAGCGCGCA GCGTCACGAC GGCACAAGGC
AATTCCGTCG GCAATCAGCA CTACAGTCAG GTGGCGTTCA CGCTGGACTA TCTGCTGTCG
AAGCGTACCG ACGTGTACTT CTCGGGCGGC TGGCAACGCG CTTCCGGCAC ATCGTCGACG
GGCGCGCCGG CGGTCGCCAA CATCGGCGGA TCCGGAGATT CATCGAATAA CCACCAGATG
GTTTATCGGC TCGCTATACG ACACAAATTC TGA
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| Protein sequence | MKTKKIEIIV GSLVGLASSV AHSQSSVTLY GEIDNGIHYQ TNVGGGKAVY MDSLNGIDGS
RWGLTGKEDL GGGLKAIFTL ESGINVNNGQ LAQGGTAFGR QAFVGLSSDA YGSLTVGRQY
DMVWYFPEFL AGAAAVGDLA SAHPGDFDNT SNSVRFNNSV RYMSPDFHGF SFGVEYSLGG
VPGDFTSTSG YSLGVGYTHG PLQIGAAFDY FKHPTSTPGN GWFTNYASGF NLLASSLNSA
YQVAQAYQDA VIAAAYTIGN ATISASYSNV QYANLGASFQ NGTAIFNNYD IGLNYRVTPA
FFVGVAYDYM KARSVTTAQG NSVGNQHYSQ VAFTLDYLLS KRTDVYFSGG WQRASGTSST
GAPAVANIGG SGDSSNNHQM VYRLAIRHKF
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