| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6491 |
|---|
| Symbol | |
|---|
| ID | 4315395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 1170120 |
|---|
| End bp | 1171202 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638154335 |
|---|
| Product | undecaprenyl-phosphate galactose phosphotransferase |
|---|
| Protein accession | YP_778369 |
|---|
| Protein GI | 115361232 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.748312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGAT ATTTCCACAG AGCGATCGAC GTCACGTTGA TCGTGTTGGG CGCGGTCGGA
ACATCCCGTG TCGGTATGGC CGACATCGGA AGTCCACCCC GACTGGATCC CTCGTTGGTC
GCATTCGTCG CCGCGCTTGC GCTGTCGGTA TTCCCCGCGT GCGGCGCCTA CTCGGCGCGA
TGCACGAAGT CGCTCGCAAG CGCGATCAGC CGCACGACGC TCGCGTGGTT CGTCGTGCAG
CTGTGCGGCC TCGTATTGCT GTTCATGATT CATCGCAGCG CGCCGCCGTT GTTGCCGTGG
TTCATCTACT GGACGCTGGT GAGCGGGATT TCGCTTCTCG TTTCACATAC GGCCGCCCTC
GTTGCATTGT CTGTCGCGCG GCCGGCCTGG CTCGGGCATT GGCAGACGGA ACATGGCTAC
GGCATCGGCG GCGCCGCCCC GGCGTCGGCC GGCGAAGCGC GCCCGTCCGT GCCGGCGCGG
TACATCGTGA AGCGCTGTTT CGACGTGATC GGCGGTGCGT TGCTGATCGT CGTGCTGTCG
CCGCTGCTGA TCACGCTGAT GGTCGTCGTA TGGTGCGACG GCGGGCCGGC GTTCTACGGA
CACGTTCGCG TCGGGCAGCA TGGGCGCAAA TTTCGATGCA TGAAGTTCCG CTCGATGGTC
GTGAACGCGG ACCAGATGCT CAAGCAACTT CTGGAAACCG ATCCTGAGGC TCGCGCCGAG
TGGGAGAGTG GCTTCAAGCT CAAGAACGAT GTCCGCGTGA CGCGTATCGG CCGCTTTCTG
CGCCGCACGA GCCTGGACGA GCTGCCGCAG CTCTGGAACG TGATGCGCGG AGAGATGAGT
CTGGTGGGGC CGCGGCCGAT CGTCGATGAA GAGCTCGCGC GTTACGGCGC CGACGTCAAG
TACTACCTGC AGGTCAGGCC CGGCATGACG GGGCTTTGGC AGGTCAGCGG CCGCAGCAAT
ACCGACTATG CGACGCGCGT GTCGCTGGAT GTGGACTATG TGAAGAACTG GTCGGTCCTT
CGGGACGTGG TGATCCTGTT CAAGACGATC AGGGTGGTCG TCAAGGGCCA CGGCGCGTAC
TGA
|
|---|
| Protein sequence | MPGYFHRAID VTLIVLGAVG TSRVGMADIG SPPRLDPSLV AFVAALALSV FPACGAYSAR
CTKSLASAIS RTTLAWFVVQ LCGLVLLFMI HRSAPPLLPW FIYWTLVSGI SLLVSHTAAL
VALSVARPAW LGHWQTEHGY GIGGAAPASA GEARPSVPAR YIVKRCFDVI GGALLIVVLS
PLLITLMVVV WCDGGPAFYG HVRVGQHGRK FRCMKFRSMV VNADQMLKQL LETDPEARAE
WESGFKLKND VRVTRIGRFL RRTSLDELPQ LWNVMRGEMS LVGPRPIVDE ELARYGADVK
YYLQVRPGMT GLWQVSGRSN TDYATRVSLD VDYVKNWSVL RDVVILFKTI RVVVKGHGAY
|
|---|
| |